By Associate Professor Jason Dowling

Conference Papers

Futterer JJ, 2010, 'Prostate Cancer MR Imaging', in Madabhushi A; Dowling J; Yan PK; Fenster A; Abolmaesumi P; Hata N (eds.), PROSTATE CANCER IMAGING: COMPUTER-AIDED DIAGNOSIS, PROGNOSIS, AND INTERVENTION, SPRINGER-VERLAG BERLIN, PEOPLES R CHINA, Beijing, pp. 1 - 3, presented at International Workshop on Prostate Cancer Imaging, PEOPLES R CHINA, Beijing, 24 September 2010, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000286796700001&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Acosta O; Dowling J; Cazoulat G; Simon A; Salvado O; De Crevoisier R; Haigron P, 2010, 'Atlas based segmentation and mapping of organs at risk from planning CT for the development of voxel-wise predictive models of toxicity in prostate radiotherapy', in Lecture Notes in Computer Science Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics, pp. 42 - 51, http://dx.doi.org/10.1007/978-3-642-15989-3_6

Dowling J; Lambert J; Parker J; Fripp J; Denham JW; Wratten C; Capp A; Tang C; Bourgeat P; Salvado O; Greer PB, 2010, 'Sci—Sat AM(1): Planning — 05: Feasibility of Atlas‐Based Organ Segmentation and Electron Density Mapping for MRI‐Based Prostate Radiation Therapy Planning', in Medical Physics, pp. 3907, http://dx.doi.org/10.1118/1.3476205

Dowling J; Bourgeat P; Raffelt D; Fripp J; Greer PB; Patterson J; Denham J; Gupta S; Tang C; Stanwell P; Ourselin S; Salvado O, 2009, 'Nonrigid correction of interleaving artefacts in pelvic MRI', in Progress in Biomedical Optics and Imaging Proceedings of SPIE, http://dx.doi.org/10.1117/12.812460

Dowling J; Planitz BM; Maeder AJ; Du J; Pham B; Boyd C; Chen S; Bradley AP; Crozier S, 2008, 'A comparison of DCT and DWT block based watermarking on medical image quality', in Lecture Notes in Computer Science Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics, pp. 454 - 466, http://dx.doi.org/10.1007/978-3-540-92238-4_35

Maeder A; Dowling J; Nguyen A; Brunton E; Nguyen P, 2008, 'Assuring authenticity of digital mammograms by image watermarking', in Lecture Notes in Computer Science Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics, pp. 204 - 211, http://dx.doi.org/10.1007/978-3-540-70538-3_29

Dowling JA; Planitz BM; Maeder AJ; Jiang D; Pham B; Boyd C; Shaokang C; Bradley AP; Crozier S, 2007, 'Visual quality assessment of watermarked medical images', in Progress in Biomedical Optics and Imaging Proceedings of SPIE, http://dx.doi.org/10.1117/12.707571

Dowling J; Boles W; Maeder A, 2006, 'A display framework for presenting information from a visual prosthesis', in 13th Annual International Conference on Mechatronics and Machine Vision in Practice 2006, pp. 230 - 235

Dowling J; Boles W; Maeder A, 2006, 'Simulated Artificial Human Vision: The Effects of Spatial Resolution and Frame Rate on Mobility', in Frontiers in Artificial Intelligence and Applications, pp. 138 - 143

Dowling J; Boles W; Maeder A, 2005, 'Mobility assessment using simulated Artificial Human Vision', in IEEE Computer Society Conference on Computer Vision and Pattern Recognition Workshops, http://dx.doi.org/10.1109/CVPR.2005.494

Dowling J; Maeder A; Boles W, 2004, 'Mobility enhancement and assessment for a visual prosthesis', in Proceedings of SPIE the International Society for Optical Engineering, pp. 780 - 791, http://dx.doi.org/10.1117/12.534866

Conference Presentations

Chin V; Finnegan RN; Chlap P; Otton J; Haidar A; Delaney GP; Holloway L; Thwaites DI; Dowling J; Vinod SK, 2022, 'MO-0889 Validation and clinical impact of a novel hybrid cardiac substructure automatic segmentation method', http://dx.doi.org/10.1016/s0167-8140(22)02455-0

Conference Abstracts

Otton J; Belous G; Finnegan R; Dowling J, 2022, '407 A Novel Machine Learning Technique For Detecting Cardiac Substructures In Computed Tomography', in Journal of Cardiovascular Computed Tomography, Elsevier BV, Vol. 16, pp. S4 - S4, http://dx.doi.org/10.1016/j.jcct.2022.06.012

Finnegan R; Chin V; Chlap P; Haidar A; Otton J; Dowling J; Thwaites D; Vinod S; Delaney G; Holloway L, 2022, 'OC-0756 Development and implementation of a hybrid method for automatic cardiac substructure segmentation', in Radiotherapy and Oncology, Elsevier BV, Vol. 170, pp. S670 - S672, http://dx.doi.org/10.1016/s0167-8140(22)02662-7

Chin RI; Chen K; Abraham CD; Robinson CG; Perkins SM; Johanns TM; Hernandez-Aya LF; Keller JW; Dowling J; Rich K; Chicoine M; Kim AH; Dunn GP; Ansstas G, 2021, 'Brain Metastases in Metastatic Cutaneous Melanoma: Patterns of Care and Clinical Outcomes in the Era of Immunotherapy and Targeted Therapy', in INTERNATIONAL JOURNAL OF RADIATION ONCOLOGY BIOLOGY PHYSICS, ELSEVIER SCIENCE INC, Vol. 111, pp. E565 - E566, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000715803801182&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Finnegan R; Otton J; Dowling J, 2021, 'Machine learning analysis of chest CT to detect cardiac abnormalities in COVID19', in EUROPEAN HEART JOURNAL, OXFORD UNIV PRESS, Vol. 42, pp. 170 - 170, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000720456900125&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Finnegan R; Reynolds H; Sun Y; Ebert M; Holloway L; Sykes J; Dowling J; Haworth A, 2021, 'A three-dimensional computational model of prostate cancer biology', in ASIA-PACIFIC JOURNAL OF CLINICAL ONCOLOGY, WILEY, Vol. 17, pp. 17 - 18, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000693805000024&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Greer P; Skehan K; Goodwin J; Dowling J; Choi JH; Sidhom M; Wilton L; Smart J; Afinidad T; Martin J, 2019, 'A Multi-Centre Study of MRI-Only Prostate Radiation Therapy Planning: A NINJA Trial Sub-Study', in ASIA-PACIFIC JOURNAL OF CLINICAL ONCOLOGY, WILEY, Vol. 15, pp. 23 - 23, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000493746400020&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Choi J; Lee D; Dowling J; OConnor L; Pichler P; Greer P, 2019, 'Bulk Anatomical Density Maps for Quality Assurance in MRI-Only Prostate Treatment Planning', in MEDICAL PHYSICS, WILEY, TX, San Antonio, Vol. 46, pp. E318 - E318, presented at Annual Meeting of the American-Association-of-Physicists-in-Medicine (AAPM), TX, San Antonio, 14 July 2019 - 18 July 2019, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000471277702102&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Finnegan R; Lorenzen E; Dowling J; Holloway L; Thwaites D; Brink C, 2019, 'Dosimetric Validation of Automatic Cardiac and Coronary Artery Segmentation in Breast Radiotherapy', in MEDICAL PHYSICS, WILEY, TX, San Antonio, Vol. 46, pp. E138 - E138, presented at Annual Meeting of the American-Association-of-Physicists-in-Medicine (AAPM), TX, San Antonio, 14 July 2019 - 18 July 2019, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000471277700168&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Marcello M; Kennedy A; Haworth A; Holloway L; Dowling J; Greer P; Gulliford S; Dearnaley D; Sydes M; Hall E; Denham J; Ebert M, 2019, 'External Validation of 3D Spatial Dose-Response Mapping for Toxicity Subsequent to Pelvic Radiotherapy', in MEDICAL PHYSICS, WILEY, TX, San Antonio, Vol. 46, pp. E314 - E314, presented at Annual Meeting of the American-Association-of-Physicists-in-Medicine (AAPM), TX, San Antonio, 14 July 2019 - 18 July 2019, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000471277702087&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Finnegan R; Dowling J; Brink C; Thwaites D; Lorenzen E; Holloway L, 2019, 'Uncertainty in Segmentation: Application to Iterative Atlas Selection', in MEDICAL PHYSICS, WILEY, TX, San Antonio, Vol. 46, pp. E139 - E139, presented at Annual Meeting of the American-Association-of-Physicists-in-Medicine (AAPM), TX, San Antonio, 14 July 2019 - 18 July 2019, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000471277700171&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Greer P; Pichler P; Young T; Martin J; Hunter P; Wratten C; Denham J; Holloway L; Sidhom M; Dowling J, 2019, 'A multi-centre study for implementation of MRI-only prostate planning', in RADIOTHERAPY AND ONCOLOGY, ELSEVIER IRELAND LTD, ITALY, Milan, Vol. 133, pp. S224 - S225, presented at 38th Annual Meeting of the European-Society-for-Radiotherapy-and-Oncology (ESTRO), ITALY, Milan, 26 April 2019 - 30 April 2019, http://dx.doi.org/10.1016/S0167-8140(19)30848-5

Largent A; Barateau A; Nunes J; Lafond C; Greer PB; Dowling JA; Saint-Jalmes H; Acosta O; De Crevoisier R, 2019, 'Patient-specific stopping power calibration for proton therapy based on proton radiographic images', in RADIOTHERAPY AND ONCOLOGY, ELSEVIER IRELAND LTD, ITALY, Milan, Vol. 133, pp. S555 - S556, presented at 38th Annual Meeting of the European-Society-for-Radiotherapy-and-Oncology (ESTRO), ITALY, Milan, 26 April 2019 - 30 April 2019, http://dx.doi.org/10.1016/S0167-8140(19)31427-6

Finnegan RN; Dowling JA; Holloway L; Otton J; Koh ES; Luo C; Satchithanandha A; Atluri P; Tang S; Delaney GP; Batumalai V; Thwaites DI, 2018, 'Feasibility of Automatic Multi-Atlas Based Cardiac Segmentation in Planning CT', in RADIOTHERAPY AND ONCOLOGY, ELSEVIER IRELAND LTD, SPAIN, Barcelona, Vol. 127, pp. S1171 - S1172, presented at 37th Meeting of the European-Society-for-Radiotherapy-and-Oncology (ESTRO), SPAIN, Barcelona, 20 April 2018 - 24 April 2018, http://dx.doi.org/10.1016/S0167-8140(18)32436-8

Preprints

Boussot V; Hémon C; Nunes J-C; Dowling J; Rouzé S; Lafond C; Barateau A; Dillenseger J-L, 2025, IMPACT: A Generic Semantic Loss for Multimodal Medical Image Registration, http://dx.doi.org/10.48550/arxiv.2503.24121

Lynch M; Manoy S; Sly PD; Wainwright C; Wolvetang E; Feenstra J; Dowling J; Ware RS; Patel M; Hermith-Ramirez D; Vogel AP; Preece K; Zappala T; Dai S; Webber A; Yeo A; Sunramanian G; Rao G; Ma CS; Jose S; Gatei M; Xin B; Sandona N; Lewindon P; Sinclair K; Nayler S; Lavin MF; Coman D, 2025, Ataxia-Telangiectasia: Treating Mitochondrial Dysfunction with a Novel Form of Anaplerosis (A-TC7), http://dx.doi.org/10.2139/ssrn.5099303

Moafa K; Antico M; Edwards C; Steffens M; Dowling J; Canty D; Fontanarosa D, 2025, Video-Based CSwin Transformer Using Selective Filtering Technique for Interstitial Syndrome Detection, http://dx.doi.org/10.20944/preprints202507.0329.v1

Nicolson A; Liu J; Dowling J; Nguyen A; Koopman B, 2024, e-Health CSIRO at RRG24: Entropy-Augmented Self-Critical Sequence Training for Radiology Report Generation, http://dx.doi.org/10.48550/arxiv.2408.03500

Liu J; Nicolson A; Dowling J; Koopman B; Nguyen A, 2024, e-Health CSIRO at "Discharge Me!" 2024: Generating Discharge Summary Sections with Fine-tuned Language Models, http://dx.doi.org/10.48550/arxiv.2407.02723

Moafa K; Antico M; Vukovic D; Edwards C; Canty D; Serra XC; Royse A; Royse C; Haji K; Dowling J; Steffens M; Fontanarosa D, 2024, Convolutional Automatic Identification of B-lines and Interstitial Syndrome in Lung Ultrasound Images Using Pre-Trained Neural Networks with Feature Fusion, http://dx.doi.org/10.21203/rs.3.rs-4487345/v1

Nicolson A; Zhuang S; Dowling J; Koopman B, 2024, The Impact of Auxiliary Patient Data on Automated Chest X-Ray Report Generation and How to Incorporate It, http://dx.doi.org/10.48550/arxiv.2406.13181

Nicolson A; Dowling J; Koopman B, 2023, Longitudinal Data and a Semantic Similarity Reward for Chest X-Ray Report Generation, http://dx.doi.org/10.48550/arxiv.2307.09758

Vukovic D; Wang A; Antico M; Steffens M; Ruvinov I; Sloun RJGV; Canty D; Royse A; Royse C; Haji K; Dowling J; Chetty G; Fontanarosa D, 2023, Automatic Deep Learning-Based Pleural Effusion Segmentation in Lung Ultrasound Images, http://dx.doi.org/10.21203/rs.3.rs-2486425/v1

Gillman A; Quah MH; Papoutsellis E; Thielemans K; Bourgeat P; Delplancke C; Mejan-Fripp J; Pasca E; Dowling J, 2023, Anatomically-guided deconvolution of PET using directional total variation regularization, http://dx.doi.org/10.1101/2023.04.23.23289004

Durrani N; Vukovic D; Burgt JVD; Antico M; van Sloun RJGV; CANTY D; Steffens M; Wang A; ROYSE A; ROYSE C; Haji K; Dowling J; Chetty G; Fontanarosa D, 2022, Automatic Deep Learning-Based Consolidation/Collapse Classification in Lung Ultrasound Images for COVID-19 Induced Pneumonia, http://dx.doi.org/10.36227/techrxiv.17912387

Durrani N; Vukovic D; Burgt JVD; Antico M; Sloun RJGV; Canty D; Steffens M; Wang A; Royse A; Royse C; Haji K; Dowling J; Chetty G; Fontanarosa D, 2022, Automatic Deep Learning-Based Consolidation/Collapse Classification in Lung Ultrasound Images for COVID-19 Induced Pneumonia, http://dx.doi.org/10.21203/rs.3.rs-1531881/v1

Nicolson A; Dowling J; Koopman B, 2022, Improving Chest X-Ray Report Generation by Leveraging Warm Starting, http://dx.doi.org/10.48550/arxiv.2201.09405

Dai W; Woo B; Liu S; Marques M; Engstrom CB; Greer PB; Crozier S; Dowling JA; Chandra SS, 2021, CAN3D: Fast 3D Medical Image Segmentation via Compact Context Aggregation, http://dx.doi.org/10.48550/arxiv.2109.05443

Gillman A; Rose S; Smith J; Dowling JA; Dowson N, 2021, A Comparison of Techniques for PET Data-Driven Tracking of Head Motion, http://dx.doi.org/10.21203/rs.3.rs-202051/v1

Liu S; Dowling JA; Engstrom C; Greer PB; Crozier S; Chandra SS, 2020, Manipulating Medical Image Translation with Manifold Disentanglement, http://dx.doi.org/10.48550/arxiv.2011.13615

Cruz RS; Lebrat L; Bourgeat P; Doré V; Dowling J; Fripp J; Fookes C; Salvado O, 2020, Going deeper with brain morphometry using neural networks, http://dx.doi.org/10.48550/arxiv.2009.03303

Liu S; Dai W; Engstrom C; Fripp J; Crozier S; Dowling JA; Chandra SS, 2020, Generalisable 3D Fabric Architecture for Streamlined Universal Multi-Dataset Medical Image Segmentation, http://arxiv.org/abs/2006.15578v4

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