Select Publications

Journal articles

Richardson H; Kumar M; Tieu MT; Parker J; Dowling JA; Arm J; Best L; Greer PB; Clapham M; Oldmeadow C; O’Connor L; Wratten C, 2022, 'Assessing the impact of magnetic resonance treatment simulation (MRSIM) on target volume delineation and dose to organs at risk for oropharyngeal radiotherapy', Journal of Medical Radiation Sciences, 69, pp. 66 - 74, http://dx.doi.org/10.1002/jmrs.552

Gillman AG; Lunardo F; Prinable J; Belous G; Nicolson A; Min H; Terhorst A; Dowling JA, 2022, 'Automated COVID-19 diagnosis and prognosis with medical imaging and who is publishing: a systematic review', Physical and Engineering Sciences in Medicine, 45, pp. 13 - 29, http://dx.doi.org/10.1007/s13246-021-01093-0

Ebert MA; Marcello M; Kennedy A; Haworth A; Holloway LC; Greer P; Dowling JA; Jameson MG; Roach D; Joseph DJ; Gulliford SL; Sydes MR; Hall E; Dearnaley DP, 2022, 'In Regard to Shortall et al', International Journal of Radiation Oncology Biology Physics, 112, pp. 831 - 833, http://dx.doi.org/10.1016/j.ijrobp.2021.10.140

O’Connor LM; Choi JH; Dowling JA; Warren-Forward H; Martin J; Greer PB, 2022, 'Comparison of Synthetic Computed Tomography Generation Methods, Incorporating Male and Female Anatomical Differences, for Magnetic Resonance Imaging-Only Definitive Pelvic Radiotherapy', Frontiers in Oncology, 12, http://dx.doi.org/10.3389/fonc.2022.822687

Finnegan RN; Reynolds HM; Ebert MA; Sun Y; Holloway L; Sykes JR; Dowling J; Mitchell C; Williams SG; Murphy DG; Haworth A, 2022, 'A statistical, voxelised model of prostate cancer for biologically optimised radiotherapy', Physics and Imaging in Radiation Oncology, 21, pp. 136 - 145, http://dx.doi.org/10.1016/j.phro.2022.02.011

Terhorst A; Dowling JA, 2022, 'Terrestrial Analogue Research to Support Human Performance on Mars: A Review and Bibliographic Analysis', Space Science and Technology United States, 2022, http://dx.doi.org/10.34133/2022/9841785

Pang S; Field M; Dowling J; Vinod S; Holloway L; Sowmya A, 2022, 'Training radiomics-based CNNs for clinical outcome prediction: Challenges, strategies and findings', Artificial Intelligence in Medicine, 123, pp. 102230, http://dx.doi.org/10.1016/j.artmed.2021.102230

Otton J; Finnegan R; Dowling J; Otton J, 2022, 'A Novel Machine Learning Technique for Detecting the Left Atrium With Limited Labelled Training Data', Heart, Lung and Circulation, 31, pp. S141 - S141, http://dx.doi.org/10.1016/j.hlc.2022.06.212

Finnegan R; Otton J; Dowling J, 2021, 'Machine learning analysis of chest CT to detect cardiac abnormalities in COVID19', European Heart Journal, 42, http://dx.doi.org/10.1093/eurheartj/ehab724.0170

Min H; Dowling J; Jameson MG; Cloak K; Faustino J; Sidhom M; Martin J; Ebert MA; Haworth A; Chlap P; De Leon J; Berry M; Pryor D; Greer P; Vinod SK; Holloway L, 2021, 'Automatic radiotherapy delineation quality assurance on prostate MRI with deep learning in a multicentre clinical trial', Physics in Medicine and Biology, 66, http://dx.doi.org/10.1088/1361-6560/ac25d5

O'Connor LM; Skehan K; Choi JH; Simpson J; Martin J; Warren-Forward H; Dowling J; Greer P, 2021, 'Optimisation and validation of an integrated magnetic resonance imaging-only radiotherapy planning solution', Physics and Imaging in Radiation Oncology, 20, pp. 34 - 39, http://dx.doi.org/10.1016/j.phro.2021.10.001

Young T; Dowling J; Rai R; Liney G; Greer P; Thwaites D; Holloway L, 2021, 'Effects of MR imaging time reduction on substitute CT generation for prostate MRI-only treatment planning', Physical and Engineering Sciences in Medicine, 44, pp. 799 - 807, http://dx.doi.org/10.1007/s13246-021-01031-0

Chlap P; Min H; Vandenberg N; Dowling J; Holloway L; Haworth A, 2021, 'A review of medical image data augmentation techniques for deep learning applications', Journal of Medical Imaging and Radiation Oncology, 65, pp. 545 - 563, http://dx.doi.org/10.1111/1754-9485.13261

Samarasinghe G; Jameson M; Vinod S; Field M; Dowling J; Sowmya A; Holloway L, 2021, 'Deep learning for segmentation in radiation therapy planning: a review', Journal of Medical Imaging and Radiation Oncology, 65, pp. 578 - 595, http://dx.doi.org/10.1111/1754-9485.13286

Ghandourh W; Dowling J; Chlap P; Oar A; Jacob S; Batumalai V; Holloway L, 2021, 'Assessing tumor centrality in lung stereotactic ablative body radiotherapy (SABR): the effects of variations in bronchial tree delineation and potential for automated methods', Medical Dosimetry, 46, pp. 94 - 101, http://dx.doi.org/10.1016/j.meddos.2020.09.004

Tsai CH; van der Burgt J; Vukovic D; Kaur N; Demi L; Canty D; Wang A; Royse A; Royse C; Haji K; Dowling J; Chetty G; Fontanarosa D, 2021, 'Automatic deep learning-based pleural effusion classification in lung ultrasound images for respiratory pathology diagnosis', Physica Medica, 83, pp. 38 - 45, http://dx.doi.org/10.1016/j.ejmp.2021.02.023

Finnegan R; Lorenzen EL; Dowling J; Thwaites D; Delaney G; Brink C; Holloway L, 2021, 'Validation of a new open-source method for automatic delineation and dose assessment of the heart and LADCA in breast radiotherapy with simultaneous uncertainty estimation', Physics in Medicine and Biology, 66, http://dx.doi.org/10.1088/1361-6560/abcb1d

Buckley JG; Smith A; Sidhom M; Rai R; Liney GP; Dowling JA; Metcalfe PE; Holloway LC; Keall PJ; Smith B, 2021, 'Measurements of human tolerance to horizontal rotation within an MRI scanner: Towards gantry-free radiation therapy', Journal of Medical Imaging and Radiation Oncology, 65, pp. 112 - 119, http://dx.doi.org/10.1111/1754-9485.13130

Finnegan RN; Orlandini L; Liao X; Yin J; Lang J; Dowling J; Fontanarosa D, 2021, 'Feasibility of using a novel automatic cardiac segmentation algorithm in the clinical routine of lung cancer patients', Plos One, 16, http://dx.doi.org/10.1371/journal.pone.0245364

Buckley JG; Dowling JA; Sidhom M; Liney GP; Rai R; Metcalfe PE; Holloway LC; Keall PJ, 2021, 'Pelvic organ motion and dosimetric implications during horizontal patient rotation for prostate radiation therapy', Medical Physics, 48, pp. 397 - 413, http://dx.doi.org/10.1002/mp.14579

Otton J; Finnegan R; Dowling J, 2021, 'Automated Cardiac Evaluation From Chest CT: Potential Role in COVID-19', Heart, Lung and Circulation, 30, pp. S175 - S176, http://dx.doi.org/10.1016/j.hlc.2021.06.186

Tahri S; Cadin C; Chourak H; Barateau A; Ribault S; Acosta O; Greer P; Dowling J; Lafond C; de Crevoisier R; Nunes J-C, 2021, 'Calcul de dose à partir d’IRM en radiothérapie de la prostate par méthode d’apprentissage profond', Cancer/Radiothérapie, 25, pp. 736 - 737, http://dx.doi.org/10.1016/j.canrad.2021.07.021

, 2021, 'EPSM 2020, Engineering and Physical Sciences in Medicine', Physical and Engineering Sciences in Medicine, 44, pp. 919 - 995, http://dx.doi.org/10.1007/s13246-021-01024-z

Chourak H; Barateau A; Cadin C; Lafond C; Nunes J; De Crevoiser R; Dowling J; Greer P; Acosta O, 2021, 'PO-1683 Spatial Characterization of errors in pseudo-CT generation for MRI-only radiotherapy', Radiotherapy and Oncology, 161, pp. S1408 - S1410, http://dx.doi.org/10.1016/s0167-8140(21)08134-2

Otton J; Finnegan R; Dowling J, 2021, 'Quantification Of Cardiac Chamber Size From Chest CT: Application To COVID19', Journal of Cardiovascular Computed Tomography, 15, pp. S27 - S27, http://dx.doi.org/10.1016/j.jcct.2021.06.216

Finnegan R; Lorenzen EL; Dowling J; Jensen I; Berg M; Thomsen MS; Delaney GP; Koh ES; Thwaites D; Brink C; Offersen BV; Holloway L, 2020, 'Analysis of cardiac substructure dose in a large, multi-centre danish breast cancer cohort (the DBCG HYPO trial): Trends and predictive modelling', Radiotherapy and Oncology, 153, pp. 130 - 138, http://dx.doi.org/10.1016/j.radonc.2020.09.004

Dowling JA; O’Connor LM, 2020, 'Deformable image registration in radiation therapy', Journal of Medical Radiation Sciences, 67, pp. 257 - 259, http://dx.doi.org/10.1002/jmrs.446

Marcello M; Denham JW; Kennedy A; Haworth A; Steigler A; Greer PB; Holloway LC; Dowling JA; Jameson MG; Roach D; Joseph DJ; Gulliford SL; Dearnaley DP; Sydes MR; Hall E; Ebert MA, 2020, 'Reduced Dose Posterior to Prostate Correlates With Increased PSA Progression in Voxel-Based Analysis of 3 Randomized Phase 3 Trials', International Journal of Radiation Oncology Biology Physics, 108, pp. 1304 - 1318, http://dx.doi.org/10.1016/j.ijrobp.2020.07.030

Gholizadeh N; Simpson J; Ramadan S; Denham J; Lau P; Siddique S; Dowling J; Welsh J; Chalup S; Greer PB, 2020, 'Voxel-based supervised machine learning of peripheral zone prostate cancer using noncontrast multiparametric MRI', Journal of Applied Clinical Medical Physics, 21, pp. 179 - 191, http://dx.doi.org/10.1002/acm2.12992

Marcello M; Denham JW; Kennedy A; Haworth A; Steigler A; Greer PB; Holloway LC; Dowling JA; Jameson MG; Roach D; Joseph DJ; Gulliford SL; Dearnaley DP; Sydes MR; Hall E; Ebert MA, 2020, 'Relationships between rectal and perirectal doses and rectal bleeding or tenesmus in pooled voxel-based analysis of 3 randomised phase III trials', Radiotherapy and Oncology, 150, pp. 281 - 292, http://dx.doi.org/10.1016/j.radonc.2020.07.048

Zhang S; Yang S; Xu P; Xu Y; Zhou G; Ou X; Wu R; Lan M; Fontanarosa D; Dowling J; Wang X; Lin S; Yi JL; Sun Y; Hu C; Lang J, 2020, 'Variations of Clinical Target Volume Delineation for Primary Site of Nasopharyngeal Cancer Among Five Centers in China', Frontiers in Oncology, 10, http://dx.doi.org/10.3389/fonc.2020.01572

Marcello M; Denham JW; Kennedy A; Haworth A; Steigler A; Greer PB; Holloway LC; Dowling JA; Jameson MG; Roach D; Joseph DJ; Gulliford SL; Dearnaley DP; Sydes MR; Hall E; Ebert MA, 2020, 'Increased Dose to Organs in Urinary Tract Associates With Measures of Genitourinary Toxicity in Pooled Voxel-Based Analysis of 3 Randomized Phase III Trials', Frontiers in Oncology, 10, pp. 1174, http://dx.doi.org/10.3389/fonc.2020.01174

Finnegan R; Lorenzen E; Dowling J; Holloway L; Thwaites D; Brink C, 2020, 'Localised delineation uncertainty for iterative atlas selection in automatic cardiac segmentation', Physics in Medicine and Biology, 65, http://dx.doi.org/10.1088/1361-6560/ab652a

Stephane K; Houssayni A; Cassard U; Barateau A; Duvergé L; Largent A; Acosta O; Nunes J; Messai T; Simon A; Dowling J; Perichon N; De Crevoisier R, 2020, 'PO-1484: MRI only based planning to decrease toxicity in prostate cancer IMRT/IGRT: a dosimetric study', Radiotherapy and Oncology, 152, pp. S798 - S799, http://dx.doi.org/10.1016/s0167-8140(21)01502-4

Largent A; Barateau A; Nunes JC; Mylona E; Castelli J; Lafond C; Greer PB; Dowling JA; Baxter J; Saint-Jalmes H; Acosta O; de Crevoisier R, 2019, 'Comparison of Deep Learning-Based and Patch-Based Methods for Pseudo-CT Generation in MRI-Based Prostate Dose Planning', International Journal of Radiation Oncology Biology Physics, 105, pp. 1137 - 1150, http://dx.doi.org/10.1016/j.ijrobp.2019.08.049

Choi JH; Lee D; O'Connor L; Chalup S; Welsh JS; Dowling J; Greer PB, 2019, 'Bulk Anatomical Density Based Dose Calculation for Patient-Specific Quality Assurance of MRI-Only Prostate Radiotherapy', Frontiers in Oncology, 9, http://dx.doi.org/10.3389/fonc.2019.00997

Dowling J; Rosenfeld A; Waldie J; Feain I, 2019, 'Opportunities in space life sciences', Australasian Physical and Engineering Sciences in Medicine, 42, pp. 663 - 664, http://dx.doi.org/10.1007/s13246-019-00769-y

Buckley JG; Rai R; Liney GP; Dowling JA; Holloway LC; Metcalfe PE; Keall PJ, 2019, 'Anatomical deformation due to horizontal rotation: Towards gantry-free radiation therapy', Physics in Medicine and Biology, 64, pp. 175014, http://dx.doi.org/10.1088/1361-6560/ab324c

Kennedy A; Dowling J; Greer PB; Holloway L; Jameson MG; Roach D; Ghose S; Rivest-Hénault D; Marcello M; Ebert MA, 2019, 'Similarity clustering-based atlas selection for pelvic CT image segmentation', Medical Physics, 46, pp. 2243 - 2250, http://dx.doi.org/10.1002/mp.13494

Finnegan R; Dowling J; Koh ES; Tang S; Otton J; Delaney G; Batumalai V; Luo C; Atluri P; Satchithanandha A; Thwaites D; Holloway L, 2019, 'Feasibility of multi-atlas cardiac segmentation from thoracic planning CT in a probabilistic framework', Physics in Medicine and Biology, 64, http://dx.doi.org/10.1088/1361-6560/ab0ea6

Veera J; Lim K; Dowling JA; O'Connor C; Holloway LC; Vinod SK, 2019, 'Dedicated MRI simulation for cervical cancer radiation treatment planning: Assessing the impact on clinical target volume delineation', Journal of Medical Imaging and Radiation Oncology, 63, pp. 236 - 243, http://dx.doi.org/10.1111/1754-9485.12831

Roach D; Holloway LC; Jameson MG; Dowling JA; Kennedy A; Greer PB; Krawiec M; Rai R; Denham J; De Leon J; Lim K; Berry ME; White RT; Bydder SA; Tan HT; Croker JD; McGrath A; Matthews J; Smeenk RJ; Ebert MA, 2019, 'Multi-observer contouring of male pelvic anatomy: Highly variable agreement across conventional and emerging structures of interest', Journal of Medical Imaging and Radiation Oncology, 63, pp. 264 - 271, http://dx.doi.org/10.1111/1754-9485.12844

Largent A; Barateau A; Nunes JC; Lafond C; Greer PB; Dowling JA; Saint-Jalmes H; Acosta O; de Crevoisier R, 2019, 'Pseudo-CT Generation for MRI-Only Radiation Therapy Treatment Planning: Comparison Among Patch-Based, Atlas-Based, and Bulk Density Methods', International Journal of Radiation Oncology Biology Physics, 103, pp. 479 - 490, http://dx.doi.org/10.1016/j.ijrobp.2018.10.002

Greer P; Martin J; Sidhom M; Hunter P; Pichler P; Choi JH; Best L; Smart J; Young T; Jameson M; Afinidad T; Wratten C; Denham J; Holloway L; Sridharan S; Rai R; Liney G; Raniga P; Dowling J, 2019, 'A multi-center prospective study for implementation of an MRI-only prostate treatment planning workflow', Frontiers in Oncology, 9, pp. 826, http://dx.doi.org/10.3389/fonc.2019.00826

Gholizadeh N; Greer PB; Simpson J; Denham J; Lau P; Dowling J; Hondermarck H; Ramadan S, 2019, 'Characterization of prostate cancer using diffusion tensor imaging: A new perspective', European Journal of Radiology, 110, pp. 112 - 120, http://dx.doi.org/10.1016/j.ejrad.2018.11.026

De Leon J; Jameson MG; Rivest-Henault D; Keats S; Rai R; Arumugam S; Wilton L; Ngo D; Liney G; Moses D; Dowling J; Martin J; Sidhom M, 2019, 'Reduced motion and improved rectal dosimetry through endorectal immobilization for prostate stereotactic body radiotherapy', British Journal of Radiology, 92, http://dx.doi.org/10.1259/bjr.20190056

Martin J; Keall P; Siva S; Greer P; Christie D; Moore K; Dowling J; Pryor D; Chong P; McLeod N; Raman A; Lynam J; Smart J; Oldmeadow C; Tang CI; Murphy DG; Millar J; Tai KH; Holloway L; Reeves P; Hayden A; Lim T; Holt T; Sidhom M, 2019, 'TROG 18.01 phase III randomised clinical trial of the Novel Integration of New prostate radiation schedules with adJuvant Androgen deprivation: NINJA study protocol', BMJ Open, 9, pp. e030731, http://dx.doi.org/10.1136/bmjopen-2019-030731

Largent A; Barateau A; Nunes J; Lafond C; Greer PB; Dowling JA; Baxter J; Saint-Jalmes H; Acosta O; de Crevoisier R, 2019, '45 A comparison of pseudo-CT generation methods for prostate MRI-based dose planning: deep learning, patch-based, atlas-based and bulk-density methods', Physica Medica, 68, pp. 28 - 28, http://dx.doi.org/10.1016/j.ejmp.2019.09.126

Nunes J-C; Largent A; Barateau A; Lafond C; Greer PB; Dowling JA; Baxter J; Castelli J; Chajon É; Périchon N; Saint-Jalmes H; de Crevoisier R; Acosta O, 2019, 'Calcul de dose direct à partir d’IRM et tomographies coniques par méthodes d’apprentissage', Cancer/Radiothérapie, 23, pp. 798 - 799, http://dx.doi.org/10.1016/j.canrad.2019.07.025

Dowling J; Yin J; Orlandini LC; Liao X; Finnegan R; Fontanarosa D, 2019, 'Feasibility of Using a Novel Automatic Cardiac Segmentation Algorithm in the Clinical Routine of Lung Cancer Patients', International Journal of Radiation Oncology*Biology*Physics, 105, pp. E724 - E725, http://dx.doi.org/10.1016/j.ijrobp.2019.06.906


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