By Professor Raina MacIntyre

Reports

MacIntyre CR, 2004, Protecting Australia from communicable diseases: everybody’s business, Commonwealth Chief Medical Officer, Department of Health and Ageing, Canberra, Australia

Greenhalgh T; Baker M; Chugtai A; Fisman D; Kunasekaran M; Kvalsvig A; Lupton D; MacIntyre CR; Meng MO; Bhattacharjee S; Tawfiq E; Ungrin M; Vipond J; Chughtai A, Masks and Respirators for Prevention of Respiratory Infections: A State of the Science Review, INPLASY - International Platform of Registered Systematic Review and Meta-analysis Protocols, http://dx.doi.org/10.37766/inplasy2024.1.0087

Honeyman D; Keep J; Heslop DJ; Lim S; Gurdasani D; Macintyre CR, The history of chemical warfare: a systematic review, INPLASY - International Platform of Registered Systematic Review and Meta-analysis Protocols, http://dx.doi.org/10.37766/inplasy2024.3.0016, https://doi.org/10.37766/inplasy2024.3.0016

Media

MacIntyre R; Chughtai A; de Silva C; Doolan C; Bahl P; Bhattacharjee S, 2020, This video shows just how easily COVID-19 could spread when people sing together, The Conversation, Australia, https://theconversation.com/this-video-shows-just-how-easily-covid-19-could-spread-when-people-sing-together-144789

MacIntyre R; Chughtai A; Doolan C; Bahl P; Bhattacharjee S, 2020, Which mask works best? We filmed people coughing and sneezing to find out, The Conversation, Australia, https://theconversation.com/which-mask-works-best-we-filmed-people-coughing-and-sneezing-to-find-out-143173

MacIntyre R; Phelps K; Maher L; Bhattacharjee S, 2020, Victorians, and anyone else at risk, should now be wearing face masks. Here’s how to make one, The Conversation, Australia, https://theconversation.com/victorians-and-anyone-else-at-risk-should-now-be-wearing-face-masks-heres-how-to-make-one-141980

Preprints

Du J; Stone H; Yang Y; Desai A; Xue H; Züfle A; MacIntyre CR; Salim FD, 2025, BLUE: Bi-layer Heterogeneous Graph Fusion Network for Avian Influenza Forecasting, http://arxiv.org/abs/2505.22692v1

Khaokaew Y; Salim FD; Züfle A; Xue H; Anderson T; MacIntyre CR; Scotch M; Heslop DJ, 2025, Evaluating the Bias in LLMs for Surveying Opinion and Decision Making in Healthcare, http://arxiv.org/abs/2504.08260v2

Berry M; MacIntyre R; Cromer D; Hacker A; Davenport M; Khoury D, 2024, Optimal deployment of limited vaccine supplies to combat mpox, http://dx.doi.org/10.1101/2024.11.03.24316551

Stone H; Jindal M; Lim S; Dawson R; Quigley A; Scotch M; MacIntyre R, 2024, Potential Pathways of Spread of Highly Pathogenic Avian Influenza A/H5N1 Clade 2.3.4.4b Across Dairy Farms in the United States, http://dx.doi.org/10.1101/2024.05.02.24306785

Hong J; Dung D; Hutchinson D; Akhtar Z; Chen R; Dawson R; Joshi A; Lim S; MacIntyre CR; Gurdasani D, 2023, Relation Extraction from News Articles (RENA): A Tool for Epidemic Surveillance, http://arxiv.org/abs/2311.01472v1

Nair SP; Quigley A; Moa A; Chughtai AA; Macintyre CR, 2023, Monitoring the burden of COVID-19 and impact of hospital transfer policies on Australian aged-care residents in residential aged-care facilities: a retrospective cohort study, http://dx.doi.org/10.21203/rs.3.rs-2765885/v1

Berry M; Khan S; Schlub T; Notaras A; Kunasekaran M; Grulich A; MacIntyre R; Davenport M; Khoury D, 2023, Predicting vaccine effectiveness in Mpox, http://dx.doi.org/10.1101/2023.11.23.23298850

Aleem M; Chughtai A; Rahman B; Akhtar Z; Chowdury F; Qadri F; MacIntyre CR, 2023, Prevalence of influenza and other acute respiratory illnesses in patients with acute myocardial infarction in Bangladesh: a cross-sectional study, http://dx.doi.org/10.22541/au.168606254.46333247/v1

Body A; Martin C; Busija L; Lal L; Ahern E; MacIntyre R; Segelov E, 2023, SARS-CoV-2 post-vaccine surveillance studies in Australian children and adults with cancer: SerOzNET Statistical Analysis Plan, http://dx.doi.org/10.1101/2023.02.26.23286261

Li M; Chong KL; Ng CS; Bahl P; de Silva CM; Verzicco R; Doolan C; MacIntyre CR; Lohse D, 2022, Towards realistic simulations of human cough: effect of droplet emission duration and spread angle, http://dx.doi.org/10.48550/arxiv.2210.00534

Dasgupta P; Amin J; Paris C; MacIntyre CR, 2022, News Coverage of Face Masks in Australia During the Early COVID-19 Pandemic: Topic Modeling Study (Preprint), http://dx.doi.org/10.2196/preprints.43011

Stone H; Heslop D; Lim S; Sarmiento I; Kunasekaran M; MacIntyre CR, 2022, Open-Source Intelligence for Detection of Radiological Events and Syndromes Following the Invasion of Ukraine in 2022: Observational Study (Preprint), http://dx.doi.org/10.2196/preprints.39895

NWACHUKWU C; MacIntyre CR; Stone H, 2021, Epidemiological and phylogenetic analyses of COVID-19 in Africa using open-source sequence data., http://dx.doi.org/10.22541/au.161160186.62286068/v1

Sitaresmi M; Seale H; Heywood A; Padmawati R; Soenarto Y; MacIntyre R; Atthobari J, 2021, Knowledge and Attitudes Towards Rotavirus Diarrhea and the Acceptance of Rotavirus Vaccination Amongst Primary Caregivers in Yogyakarta, Indonesia: A Qualitative Study, http://dx.doi.org/10.21203/rs.3.rs-136712/v1

Trent M; Salmon D; MacIntyre CR, 2020, Using the health belief model to identify barriers to seasonal influenza vaccination among Australian adults in 2019, http://dx.doi.org/10.22541/au.160844949.95822289/v1

Adam D; Chen X; Scotch M; MacIntyre CR; Dwyer D; Kok J, 2020, The Molecular Epidemiology and Clinical Phylogenetics of Rhinoviruses among Paediatric Cases in Sydney, Australia., http://dx.doi.org/10.22541/au.160614561.14239652/v1

Akhtar Z; Aleem MA; Ghosh PK; Islam AKMM; Chowdhury F; MacIntyre CR; Fröbert O, 2020, In-hospital and 30-day major adverse cardiac events in patients referred for ST-segment elevation myocardial infarction in Dhaka, Bangladesh, http://dx.doi.org/10.21203/rs.3.rs-87528/v1

Wang X; Pan Y; Zhang D; Chen L; Jia L; Li X; Yang P; Wang Q; Macintyre CR, 2020, Basic epidemiological parameter values from data of real-world in mega-cities: the characteristics of COVID-19 in Beijing, China, http://dx.doi.org/10.21203/rs.3.rs-23937/v2

Najmi A; Safarighouzhdi F; Miller EJ; MacIntyre R; Rashidi TH, 2020, Determination of COVID-19 parameters for an agent-based model: Easing or tightening control strategies, http://dx.doi.org/10.1101/2020.06.20.20135186

Wang X; Pan Y; Zhang D; Chen L; Jia L; Li X; Yang P; Wang Q; Macintyre CR, 2020, Basic epidemiological parameter values from data of real-world in mega-cities: the characteristics of COVID-19 in Beijing, China, http://dx.doi.org/10.21203/rs.3.rs-23937/v1

Ngonghala CN; Iboi E; Eikenberry S; Scotch M; MacIntyre CR; Bonds MH; Gumel AB, 2020, Mathematical assessment of the impact of non-pharmaceutical interventions on curtailing the 2019 novel Coronavirus, http://dx.doi.org/10.48550/arxiv.2004.07391

Costantino V; Heslop D; Macintyre R, 2020, The effectiveness of full and partial travel bans against COVID-19 spread in Australia for travellers from China, http://dx.doi.org/10.21203/rs.3.rs-17714/v1

Quigley AL; Nguyen PY; Stone H; Heslop D; Chughtai AA; MacIntyre R, 2020, Estimated Mask Use and Temporal Relationship to COVID-19 Epidemiology of Black Lives Matter Protests in 12 Cities, http://dx.doi.org/10.2139/ssrn.3712951

Ngonghala C; Iboi E; Eikenberry S; Scotch M; MacIntyre CR; Bonds M; Gumel A, 2020, Mathematical assessment of the impact of non-pharmaceutical interventions on curtailing the 2019 novel Coronavirus, http://dx.doi.org/10.1101/2020.04.15.20066480

MacIntyre R; Costantino V; Trent M, 2020, Modelling of COVID-19 vaccination strategies and herd immunity, in scenarios of limited and full vaccine supply in NSW, Australia, http://dx.doi.org/10.1101/2020.12.15.20248278

Costantino V; Heslop D; MacIntyre R, 2020, The effectiveness of full and partial travel bans against COVID-19 spread in Australia for travellers from China, http://dx.doi.org/10.1101/2020.03.09.20032045

Scott N; Saul A; Spelman T; Stoove M; Pedrana A; Saeri A; Grundy E; Smith L; Toole M; MacIntyre R; Crabb B; Hellard ME, 2020, The Introduction of a Mandatory Mask Policy Was Associated with Significantly Reduced COVID-19 Cases in a Major Metropolitan City, http://dx.doi.org/10.2139/ssrn.3714648

Joshi A; Karimi S; Sparks R; Paris C; MacIntyre CR, 2019, A Comparison of Word-based and Context-based Representations for Classification Problems in Health Informatics, http://dx.doi.org/10.48550/arxiv.1906.05468

Joshi A; Karimi S; Sparks R; Paris C; MacIntyre CR, 2019, Survey of Text-based Epidemic Intelligence: A Computational Linguistic Perspective, http://arxiv.org/abs/1903.05801v1

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