By Professor Marcel Dinger

Preprints

Holliday H; Khan A; Ehteda A; Nguyen H; Ross S; Jayatilleke N; Gopalakrishnan A; Wang E; Colino Sanguino Y; Kavanagh D; Guo X; Liu J; Lawrence D; Sun C; Lehmann R; Ip CK; Lee A; Rangel-Sanchez L; Li W; Salomon R; Firestein R; Weatheritt R; Valdes-Mora F; Dinger M; Phoenix T; Mayoh C; Rayner B; Tsoli M; Ziegler D, 2024, Chromatin remodeling with combined FACT and BET inhibition disrupts oncogenic transcription in Diffuse Midline Glioma, http://dx.doi.org/10.1101/2024.06.06.597703

Su Z; Fang M; Smolnikov A; Vafaee F; Dinger M; Oates E, 2024, Genes in Humans and Mice: Insights from Deep learning of 777K Bulk Transcriptomes, http://dx.doi.org/10.1101/2024.04.01.587517

Su Z; Fang M; Smolnikov A; Dinger M; Oates E; Vafaee F, 2024, Multifaceted Representation of Genes via Deep Learning of Gene Expression Networks, http://dx.doi.org/10.1101/2024.03.07.583777

Ross S; Vázquez-Marín J; Gert KRB; González-Rajal Á; Dinger M; Pauli A; Martínez-Morales JR; Bogdanovic O, 2023, Evolutionary conservation of embryonic DNA methylome remodelling in distantly related teleost species, http://dx.doi.org/10.1101/2023.05.24.542066

Zammit N; Gray P; Siggs O; Yap JY; Russell A; Cultrone D; Warren J; Walters S; Brink R; Zahra D; Burnett D; Gayevskiy V; Minoche A; Ziegler J; Craig M; Wong M; Benitez-Aguirre P; Teo J; Cowley M; Dinger M; Tangye S; Burke C; Phan T; Goodnow C; Grey S, 2022, Environmental and genetic disease modifiers of haploinsufficiency of A20, http://dx.doi.org/10.1101/2022.03.19.485004

Peña Martinez CD; Zeraati M; Rouet R; Mazigi O; Gloss B; Chan C-L; Bryan T; Smith N; Dinger M; Kummerfeld S; Christ D, 2022, Human genomic DNA is widely interspersed with i-motif structures, http://dx.doi.org/10.1101/2022.04.14.488274

Minoche AE; Lundie B; Peters GB; Ohnesorg T; Pinese M; Thomas DM; Zankl A; Roscioli T; Schonrock N; Kummerfeld S; Burnett L; Dinger ME; Cowley MJ, 2020, ClinSV: Clinical grade structural and copy number variant detection from whole genome sequencing data, http://dx.doi.org/10.1101/2020.06.30.20143453

Zammit N; Siggs OM; Gray P; King C; Christ D; Goodnow CC; Grey S; Cowley M; Craig M; Dinger M; Ziegler J; Villanueva J; Cultrone D; Brink R, 2019, Phospho-tuning immunity through Denisovan, modern human and mouse TNFAIP3 gene variants, http://dx.doi.org/10.1101/589507

Gayevskiy V; Roscioli T; Dinger M; Cowley M, 2019, Seave: a comprehensive web platform for storing and interrogating human genomic variation, http://dx.doi.org/10.1101/258061

Puttick C; Kumar K; Davis R; Pinese M; Thomas D; Dinger M; Sue C; Cowley M, 2019, mity: A highly sensitive mitochondrial variant analysis pipeline for whole genome sequencing data, http://dx.doi.org/10.1101/852210

Pinese M; Lacaze P; Rath E; Stone A; Brion M-J; Ameur A; Nagpal S; Puttick C; Husson S; Degrave D; Navin Cristina T; Silva Kahl V; Statham A; Woods R; McNeil J; Riaz M; Barr M; Nelson M; Reid C; Murray A; Shah R; Wolfe R; Atkins J; Fitzsimmons C; Cairns H; Green M; Carr V; Cowley M; Pickett H; James P; Powell J; Kaplan W; Gibson G; Gyllensten U; Cairns M; McNamara M; Dinger M; Thomas D, 2018, The Medical Genome Reference Bank: Whole genomes and phenotype of 2,570 healthy elderly, http://dx.doi.org/10.1101/473348

Lacaze P; Pinese M; Kaplan W; Stone A; Brion M-J; Woods RL; McNamara M; McNeil JJ; Dinger ME; Thomas DM, 2018, The Medical Genome Reference Bank: a whole-genome data resource of 4,000 healthy elderly individuals. Rationale and cohort design, http://dx.doi.org/10.1101/274019

Deveson I; Brunck M; Blackburn J; Tseng E; Hon T; Clark T; Clark M; Crawford J; Dinger M; Nielsen L; Mattick J; Mercer T, 2017, Universal alternative splicing of noncoding exons, http://dx.doi.org/10.1101/136275

Signal B; Gloss BS; Dinger ME; Mercer TR, 2016, Machine-learning annotation of human splicing branchpoints, http://dx.doi.org/10.1101/094003

Hoang VLT; Tom LN; Quek X-C; Tan J-M; Payne EJ; Lin LL; Sinnya S; Raphael AP; Lambie D; Frazer IH; Dinger ME; Soyer HP; Prow TW, 2016, RNA-seq reveals more consistent reference genes for gene expression studies in human non-melanoma skin cancers, http://dx.doi.org/10.7287/peerj.preprints.2331

Hoang VLT; Tom LN; Quek X-C; Tan J-M; Payne EJ; Lin LL; Sinnya S; Raphael AP; Lambie D; Frazer IH; Dinger ME; Soyer HP; Prow TW, 2016, RNA-seq reveals more consistent reference genes for gene expression studies in human non-melanoma skin cancers, http://dx.doi.org/10.7287/peerj.preprints.2331v1

Gloss B; Signal B; Cheetham S; Gruhl F; Kaczorowski D; Perkins A; Dinger M, 2016, High temporal resolution of gene expression dynamics in developing mouse embryonic stem cells, http://dx.doi.org/10.1101/084442

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