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Journal articles

Braithwaite J; Fisher G; Harrison R; Mumford V; Davis EA; de Wet C; Homaira N; Mitchell R; Jaffe A; Willcock S; McMullan B; Arnolda G; Zurynski Y; Woodhead H; Goodger B; White L; Elias L; Vir S; Durrington L; Smith M; Fraser L; Swann J; Flynn A; Massis C; Benson I; Vickery T; Corbett H; Rojas C; Hibbert P, 2025, 'The National Paediatric Applied Research Translation Initiative (N-PARTI): using implementation science to improve primary care for Australian children with asthma, type 1 diabetes, and infections', BMC Health Services Research, 25, http://dx.doi.org/10.1186/s12913-025-12491-5

Hameed S; Barnes EH; Briody J; Wainwright CE; Hilton J; Field PI; Tai A; Belessis Y; Chan CL; Selvadurai H; Prentice B; Katz T; McMahon SK; Neylan M; Pena A; Jaffe A; Verge CF, 2025, 'Insulin for early glycaemic abnormality in children with cystic fibrosis without cystic fibrosis-related diabetes (CF-IDEA): a randomised controlled trial', Lancet Child and Adolescent Health, 9, pp. 371 - 382, http://dx.doi.org/10.1016/S2352-4642(25)00099-9

Palmer EE; Recsei K; McKnight L; Roberts N; Baynam G; Zurynski Y; Farrar M; Healy L; Millis N; Jaffe A, 2025, '“You get left behind and lost in a complex world of rare care”: equity in access to rare disease care—learnings from the Australian Rare Disease Awareness, Education, Support, and Training (RArEST) project', Ebiomedicine, 115, http://dx.doi.org/10.1016/j.ebiom.2025.105710

Fathima P; Pan E; Marsh J; Newall N; Meares T; McLeod C; Shanthikumar S; Jaffe A; Tai A; Ward N; Sivam S; Selvadurai H; Schultz A; Snelling T, 2025, 'BEAT-CF (Bayesian Evidence Adaptive Treatment for people with Cystic Fibrosis): description of a prospective cohort for nested studies in cystic fibrosis', Respiratory Medicine, 241, http://dx.doi.org/10.1016/j.rmed.2025.108080

Chan C; Coffey M; Murphy C; McKay I; Abdu J; Paida K; Tam RY; Wrigley-Carr H; Prentice B; Owens L; Belessis Y; Chuang S; Jaffe A; van Dorst J; Ooi CY, 2025, 'The Prevalence of Polyketide Synthase-Positive E. coli in Cystic Fibrosis', Microorganisms, 13, http://dx.doi.org/10.3390/microorganisms13030681

Fawcett LK; Waters SA; Jaffe A, 2025, 'The equitable challenges to quality use of modulators for cystic fibrosis in Australia', Medical Journal of Australia, 222, pp. 4 - 9, http://dx.doi.org/10.5694/mja2.52527

Mackle R; Chan M; Lay M; Purcell M; Campbell N; Jaffe A; Owens L; Gray M; Homaira N, 2025, 'Parental perceptions and knowledge toward Asthma Action Plans', Journal of Asthma, 62, pp. 435 - 444, http://dx.doi.org/10.1080/02770903.2024.2408758

Homaira N; Khan JR; Jaffé A, 2025, 'Serotype 3 associated invasive pneumococcal disease in children: Analysis of 15 years of Australian national surveillance data', Thorax, http://dx.doi.org/10.1136/thorax-2025-223125

Rashid MM; Hu N; Khan JR; Chan M; Gray M; Owens L; Jaffe A; Homaira N, 2025, 'The High Burden of Asthma Readmission Among Australian Children: A Population-Based Cohort Study', Respirology, http://dx.doi.org/10.1111/resp.70049

Coffey MJ; van Dorst J; Pushpakumara BU; Hudson J; Halim J; Day AS; Oliver M; Ranganathan S; Wainwright C; Selvadurai H; Thomas T; Jaffe A; Ooi CY, 2025, 'WS19.06 Probiotics and the EARly Life effects on intestinal bacteria and inflammation in children with Cystic Fibrosis (PEARL-CF) Study', Journal of Cystic Fibrosis, 24, pp. S35 - S36, http://dx.doi.org/10.1016/j.jcf.2025.03.676

Ozturk A; Chan M; Khan JR; Hu N; Mcmullan B; Britton PN; Bartlett A; Kandasamy R; Saravanos GL; Prentice B; Shi T; Jaffe A; Owens L; Homaira N, 2024, 'Clinical Characteristics and In-hospital Outcomes Associated With Respiratory Syncytial Virus vs Other Viral Acute Lower Respiratory Infections in Hospitalized Children Younger Than 2 Years', JOURNAL OF INFECTIOUS DISEASES, http://dx.doi.org/10.1093/infdis/jiae543

Khan JR; Lingam R; Owens L; Chen K; Shanthikumar S; Oo S; Schultz A; Widger J; Bakar KS; Jaffe A; Homaira N, 2024, 'Social deprivation and spatial clustering of childhood asthma in Australia', Global Health Research and Policy, 9, http://dx.doi.org/10.1186/s41256-024-00361-2

Doumit M; Pacey V; Jaffe A; Gray K, 2024, 'Understanding the acceptability of the changing model of care in cystic fibrosis', Respiratory Medicine, 234, http://dx.doi.org/10.1016/j.rmed.2024.107847

McKnight L; Schultz A; Vidic N; Palmer EE; Jaffe A, 2024, 'Learning to make a difference for chILD: Value creation through network collaboration and team science', Pediatric Pulmonology, 59, pp. 2257 - 2266, http://dx.doi.org/10.1002/ppul.26377

Walte AF; Torres-Cadena R; Dayaratne WLN; Jaffe A, 2024, 'Mixed-Metal Alloying in Hybrid Bronzes', Journal of the American Chemical Society, 146, pp. 23699 - 23703, http://dx.doi.org/10.1021/jacs.4c08960

Mackle R; Gonzalez CC; Chan M; Hodgins M; Hu N; Angell B; Owens L; Fletcher J; McCrossin T; Piper S; Doyle AK; Woolfenden S; Gould B; Ward F; Lingam R; Jaffe A; Gray M; Homaira N; Du H; Haggie S; Flynn A; Bell R; O'Meara M; Crum M; Langstaff C; Molnar K; Zanotti T; Molloy S; Dove C; Hoye A; Reed A; Campbell T; Hutchinson A; Meldrum D; Hodges J; Wilson M; Shaw B; Ratoni T; Petersen S; Greenway K; Carmichael T; Johnston M; Hill S; Saberi E; Behari K; Sweeney S; Moore T; Smeets TI; Eather N; Hunt S; Fryer A; Nichols B; Connors J; De Groot A; Tyler T; Leccese K; Harrison P; Mitchell A; Bonal M; Singh R; Smith D; Hale M; Lloyd C; White JA; Geale L; Hankinson J; Eddie S; Fisher K; Buck G; Tozer A; King F; Vartiainen A; Archer K; Howard D; Williams L; Fitzgerald D; Sgarlata J; Berry M; Edwards R; Streat K; Mannix P; Cole K; Reedy G; Hayes K; De Keizer S; McNamara P, 2024, 'Asthma Care from Home: Study protocol for an effectiveness-implementation evaluation of a virtually enabled asthma care initiative in children in rural NSW', Plos One, 19, http://dx.doi.org/10.1371/journal.pone.0304711

Lim SA; Chan M; Hu N; McMullan B; Britton PN; Bartlett A; Kandasamy R; Saravanos GL; Prentice B; Jaffe A; Owens L; Homaira N, 2024, 'Risk Factors and Clinical Prognosis Associated with RSV-ALRI Intensive Care Unit Admission in Children <2 Years of Age: A Multicenter Study', Pediatric Infectious Disease Journal, 43, pp. 511 - 517, http://dx.doi.org/10.1097/INF.0000000000004288

Rashid MM; Ahmed S; Owens L; Hu N; Jaffe A; Homaira N, 2024, 'Asthma-community acquired pneumonia co-diagnosis in children: a scoping review', Journal of Asthma, 61, pp. 282 - 291, http://dx.doi.org/10.1080/02770903.2023.2280843

Robertson EG; Kelada L; Ilin R; Palmer EE; Bye A; Jaffe A; Kennedy SE; Ooi CY; Drew D; Wakefield CE, 2024, 'Psychological wellbeing among parents of a child living with a serious chronic illness: A cross-sectional survey study', Journal of Child Health Care, http://dx.doi.org/10.1177/13674935241238485

Doumit M; Jaffe A; Pacey V; Gray K, 2024, 'P440 Understanding the acceptability of the increased use of telehealth in cystic fibrosis care', Journal of Cystic Fibrosis, 23, pp. S202 - S202, http://dx.doi.org/10.1016/s1569-1993(24)00734-3

Schultz A; McLeod C; Berry S; Marsh J; McKenzie A; Messer M; Wood J; Saville B; Jaffe A; Ranganathan S; Stick S; Wark P; Webb S; Snelling T, 2023, 'BEAT CF pulmonary exacerbations core protocol for evaluating the management of pulmonary exacerbations in people with cystic fibrosis', Trials, 24, http://dx.doi.org/10.1186/s13063-023-07076-8

Xu S; Deo RC; Soar J; Barua PD; Faust O; Homaira N; Jaffe A; Kabir AL; Acharya UR, 2023, 'Automated detection of airflow obstructive diseases: A systematic review of the last decade (2013-2022)', Computer Methods and Programs in Biomedicine, 241, http://dx.doi.org/10.1016/j.cmpb.2023.107746

Homaira N; Strachan R; Quinn H; Beggs S; Bhuiyan M; Bowen A; Fawcett LK; Gilbert GL; Lambert SB; Macartney K; Marshall HS; Martin AC; McCallum G; McCullagh A; McDonald T; Selvadurai H; McIntyre P; Oftadeh S; Ranganathan S; Saunders T; Suresh S; Wainwright C; Wilson A; Wong M; Jaffe A; Snelling T, 2023, 'Erratum to “Real world impact of 13vPCV in preventing invasive pneumococcal pneumonia in Australian children: A national study” [Vaccine 41(1) (2023) 85–91, (S0264410X22013822), (10.1016/j.vaccine.2022.11.006)]', Vaccine, 41, pp. 6401 - 6402, http://dx.doi.org/10.1016/j.vaccine.2023.07.039

Singh J; Fitzgerald DA; Jaffe A; Hunt S; Barr JJ; Iredell J; Selvadurai H, 2023, 'Single-arm, open-labelled, safety and tolerability of intrabronchial and nebulised bacteriophage treatment in children with cystic fibrosis and Pseudomonas aeruginosa', BMJ Open Respiratory Research, 10, http://dx.doi.org/10.1136/bmjresp-2022-001360

Doumit M; Chuang S; Middleton P; Selvadurai H; Sivam S; Ruseckaite R; Ahern S; Mallitt KA; Pacey V; Gray K; Jaffe A, 2023, 'Clinical outcomes of adults and children with cystic fibrosis during the COVID-19 pandemic', Journal of Cystic Fibrosis, 22, pp. 581 - 586, http://dx.doi.org/10.1016/j.jcf.2022.09.006

Fawcett LK; Turgutoglu N; Allan KM; Belessis Y; Widger J; Jaffe A; Waters SA, 2023, 'Comparing Cytology Brushes for Optimal Human Nasal Epithelial Cell Collection: Implications for Airway Disease Diagnosis and Research', Journal of Personalized Medicine, 13, pp. 864, http://dx.doi.org/10.3390/jpm13050864

Wong SL; Kardia E; Vijayan A; Umashankar B; Pandzic E; Zhong L; Jaffe A; Waters SA, 2023, 'Molecular and Functional Characteristics of Airway Epithelium under Chronic Hypoxia', International Journal of Molecular Sciences, 24, http://dx.doi.org/10.3390/ijms24076475

Stiboy E; Chan M; Islam MS; Saravanos GL; Lui K; Jaffe A; Homaira N, 2023, 'Variation in clinical practice guidelines for use of palivizumab in preventing severe respiratory syncytial viral (RSV) disease in high-risk infants', Pediatric Pulmonology, 58, pp. 1210 - 1220, http://dx.doi.org/10.1002/ppul.26324

Stark Z; Boughtwood T; Haas M; Braithwaite J; Gaff CL; Goranitis I; Spurdle AB; Hansen DP; Hofmann O; Laing N; Metcalfe S; Newson AJ; Scott HS; Thorne N; Ward RL; Dinger ME; Best S; Long JC; Grimmond SM; Pearson J; Waddell N; Barnett CP; Cook M; Field M; Fielding D; Fox SB; Gecz J; Jaffe A; Leventer RJ; Lockhart PJ; Lunke S; Mallett AJ; McGaughran J; Mileshkin L; Nones K; Roscioli T; Scheffer IE; Semsarian C; Simons C; Thomas DM; Thorburn DR; Tothill R; White D; Dunwoodie S; Simpson PT; Phillips P; Brion MJ; Finlay K; Quinn MC; Mattiske T; Tudini E; Boggs K; Murray S; Wells K; Cannings J; Sinclair AH; Christodoulou J; North KN, 2023, 'Australian Genomics: Outcomes of a 5-year national program to accelerate the integration of genomics in healthcare', American Journal of Human Genetics, 110, pp. 419 - 426, http://dx.doi.org/10.1016/j.ajhg.2023.01.018

Homaira N; Strachan R; Quinn H; Beggs S; Bhuiyan M; Bowen A; Fawcett LK; Gilbert GL; Lambert SB; Macartney K; Marshall HS; Martin MD AC; McCallum G; McCullagh A; McDonald T; Selvadurai H; McIntyre P; Oftadeh S; Ranganathan PhD S; Saunders T; Suresh S; Wainwright C; Wilson A; Wong M; Jaffe A; Snelling T, 2023, 'Real world impact of 13vPCV in preventing invasive pneumococcal pneumonia in Australian children: A national study', Vaccine, 41, pp. 85 - 91, http://dx.doi.org/10.1016/j.vaccine.2022.11.006

Chan M; Owens L; Gray ML; Selvadurai H; Jaffe A; Homaira N, 2023, 'Asthma and Susceptibility to COVID-19 in Australian Children During Alpha, Delta and Omicron Waves of the COVID-19 Pandemic', Journal of Asthma and Allergy, 16, pp. 1139 - 1155, http://dx.doi.org/10.2147/JAA.S421158

Chan M; Owens L; Gray ML; Selvadurai H; Jaffe A; Homaira N, 2023, 'Corrigendum to: Asthma and Susceptibility to COVID-19 in Australian Children During Alpha, Delta and Omicron Waves of the COVID-19 Pandemic (J Asthma Allergy. 2023;16:1139–1155)', Journal of Asthma and Allergy, 16, pp. 1195 - 1196, http://dx.doi.org/10.2147/JAA.S446596

McKay I; van Dorst J; Katz T; Doumit M; Prentice B; Owens L; Belessis Y; Chuang S; Jaffe A; Thomas T; Coffey M; Ooi CY, 2023, 'Diet and the gut-lung axis in cystic fibrosis–direct & indirect links', Gut Microbes, 15, http://dx.doi.org/10.1080/19490976.2022.2156254

Allan KM; Astore MA; Kardia E; Wong SL; Fawcett LK; Bell JL; Visser S; Chen PC; Griffith R; Jaffe A; Sivam S; Vittorio O; Kuyucak S; Waters SA, 2023, 'Q1291H-CFTR molecular dynamics simulations and ex vivo theratyping in nasal epithelial models and clinical response to elexacaftor/tezacaftor/ivacaftor in a Q1291H/F508del patient', Frontiers in Molecular Biosciences, 10, http://dx.doi.org/10.3389/fmolb.2023.1148501

Palmer EE; Millis N; Farrar M; Zurynski Y; Baynam G; Jaffe A, 2023, 'Rare diseases: New approaches to diagnosis and care', Medicine Today, 24, pp. 69 - 76

Dwyer TJ; Elkins MR; Dentice R; Forbes S; Cooper P; Jaffe A; Bishop J; Middleton PG; Wark P; Bye PTP, 2023, 'Saline at lower tonicity in cystic fibrosis (SALTI-CF) trial comparing 0.9% versus 3% versus 6% nebulised saline', European Respiratory Journal, 62, http://dx.doi.org/10.1183/13993003.00960-2021

Doumit M; Strachan R; Lazarus R; Middleton P; Dentice R; Marouvo J; Jeffrey L; Selvadurai H; Sivam S; Pacey V; Jaffe A; Gray K, 2023, 'Screening for Cystic Fibrosis Related Complications in the Context of a Pandemic and Altered Models of Care', Health Services Insights, 16, http://dx.doi.org/10.1177/11786329231205145

Thomsen A; Belessis Y; Bell R; Chuang S; Coward E; Field P; Jaffe A; McBride J; Plush L; Prentice B; Strachan R; Owens L, 2023, 'P345 The clinical impact of reduced dose prescribing of elexacaftor/tezaxaftor/ivacaftor (ETI) in children with cystic fibrosis', Journal of Cystic Fibrosis, 22, pp. S170 - S170, http://dx.doi.org/10.1016/s1569-1993(23)00715-4

Homaira N; Hu N; Owens L; Chan M; Gray M; Britton PN; Selvadurai H; Lingam R; Jaffe A, 2022, 'Impact of lockdowns on paediatric asthma hospital presentations over three waves of COVID-19 pandemic', Allergy Asthma and Clinical Immunology, 18, http://dx.doi.org/10.1186/s13223-022-00691-1

Xiong H; Berkovsky S; Kâafar MA; Jaffe A; Coiera E; Sharan RV, 2022, 'Reliability of crowdsourced data and patient-reported outcome measures in cough-based COVID-19 screening', Scientific Reports, 12, http://dx.doi.org/10.1038/s41598-022-26492-5

Kelada L; Wakefield CE; Drew D; Ooi CY; Palmer EE; Bye A; De Marchi S; Jaffe A; Kennedy S, 2022, 'Siblings of young people with chronic illness: Caring responsibilities and psychosocial functioning', Journal of Child Health Care, 26, pp. 581 - 596, http://dx.doi.org/10.1177/13674935211033466

Temple SEL; Ho G; Bennetts B; Boggs K; Vidic N; Mowat D; Christodoulou J; Schultz A; Gayagay T; Roscioli T; Zhu Y; Lunke S; Armstrong D; Harrison J; Kapur N; McDonald T; Selvadurai H; Tai A; Stark Z; Jaffe A, 2022, 'The role of exome sequencing in childhood interstitial or diffuse lung disease', Orphanet Journal of Rare Diseases, 17, http://dx.doi.org/10.1186/s13023-022-02508-1

Allan KM; Astore MA; Fawcett LK; Wong SL; Chen PC; Griffith R; Jaffe A; Kuyucak S; Waters SA, 2022, 'S945L-CFTR molecular dynamics, functional characterization and tezacaftor/ivacaftor efficacy in vivo and in vitro in matched pediatric patient-derived cell models', Frontiers in Pediatrics, 10, pp. 1062766, http://dx.doi.org/10.3389/fped.2022.1062766

Homaira N; Dickins E; Hodgson S; Chan M; Wales S; Gray M; Donnelly S; Burns C; Owens L; Plaister M; Flynn A; Andresen J; Keane K; Wheeler K; Gould B; Shaw N; Jaffe A; Breen C; Altman L; Woolfenden S, 2022, 'Impact of integrated care coordination on pediatric asthma hospital presentations', Frontiers in Pediatrics, 10, pp. 929819, http://dx.doi.org/10.3389/fped.2022.929819

McLoone J; Wakefield CE; Marshall GM; Pierce K; Jaffe A; Bye A; Kennedy SE; Drew D; Lingam R, 2022, 'It's made a really hard situation even more difficult: The impact of COVID-19 on families of children with chronic illness', Plos One, 17, http://dx.doi.org/10.1371/journal.pone.0273622

Stick SM; Foti A; Ware RS; Tiddens HAWM; Clements BS; Armstrong DS; Selvadurai H; Tai A; Cooper PJ; Byrnes CA; Belessis Y; Wainwright C; Jaffe A; Robinson P; Saiman L; Sly PD, 2022, 'The effect of azithromycin on structural lung disease in infants with cystic fibrosis (COMBAT CF): a phase 3, randomised, double-blind, placebo-controlled clinical trial', Lancet Respiratory Medicine, 10, pp. 776 - 784, http://dx.doi.org/10.1016/S2213-2600(22)00165-5

Wong SL; Awatade NT; Astore MA; Allan KM; Carnell MJ; Slapetova I; Chen PC; Setiadi J; Pandzic E; Fawcett LK; Widger JR; Whan RM; Griffith R; Ooi CY; Kuyucak S; Jaffe A; Waters SA, 2022, 'Molecular Dynamics and Theratyping in Airway and Gut Organoids Reveal R352Q-CFTR Conductance Defect', American Journal of Respiratory Cell and Molecular Biology, 67, pp. 99 - 111, http://dx.doi.org/10.1165/rcmb.2021-0337OC

Kelada L; Wakefield C; Vidic N; Armstrong DS; Bennetts B; Boggs K; Christodoulou J; Harrison J; Ho G; Kapur N; Lindsey-Temple S; McDonald T; Mowat D; Schultz A; Selvadurai H; Tai A; Jaffe A, 2022, 'Genomic testing for children with interstitial and diffuse lung disease (chILD): Parent satisfaction, understanding and health-related quality of life', BMJ Open Respiratory Research, 9, http://dx.doi.org/10.1136/bmjresp-2021-001139

Saravanos GL; Hu N; Homaira N; Muscatello DJ; Jaffe A; Bartlett AW; Wood NJ; Rawlinson W; Kesson A; Lingam R; Britton PN, 2022, 'RSV Epidemiology in Australia Before and During COVID-19', Pediatrics, 149, http://dx.doi.org/10.1542/peds.2021-053537

Homaira N; Binks M; Walker G; Larter N; Clark K; Campbell M; McHugh L; Briggs N; Nyiro J; Stelzer-Braid S; Hu N; Macartney K; Snelling T; Omer SB; Rawlinson W; Andrews R; Jaffe A, 2022, 'Transplacental transfer of RSV antibody in Australian First Nations infants', Journal of Medical Virology, 94, pp. 782 - 786, http://dx.doi.org/10.1002/jmv.27383


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