By Dr Omid Faridani

Preprints

Frisendahl C; Gemzell-Danielsson K; Nair K; Koch F; Menezes J; Sheikhi M; Dahlgren K; Alnahal W; Lindgren K; Bohlin T; Olofsson J; Tohonen V; Vafaee F; Grace LP; Boggavarapu NR; Faridani O, 2025, Blastocoel fluid RNA predicts pregnancy outcome in assisted reproduction, http://dx.doi.org/10.1101/2025.03.09.641486

Rafeie M; Vafaee F; Faridani O, 2025, Medlib: A Feature-Rich C/C++ Library for Exact Alignment of Nanopore Sequences Using Multiple Edit Distance, http://dx.doi.org/10.1101/2025.05.01.651420

Tarbier M; Mackowiak SD; Sekar V; Bonath F; Yapar E; Fromm B; Faridani OR; Biryukova I; Friedländer MR, 2024, Landscape of microRNA and target expression variation and covariation in single mouse embryonic stem cells, http://dx.doi.org/10.1101/2024.03.24.586475

Schnegg-Kaufmann A; Thoms J; Bhuyan GS; Hampton H; Vaughan L; Rutherford K; Kakadia P; Johansson E; Failes T; Arndt G; Koval J; Lindeman R; Warburton P; Rodriguez-Meira A; Mead A; Unnikrishnan A; Bohlander S; Papaemmanuil E; Faridani O; Jolly C; Zanini F; Pimanda J, 2022, Single cell genotyping of matched bone marrow and peripheral blood cells in treatment naive and AZA-treated MDS and CMML, http://dx.doi.org/10.1101/2022.01.20.476890

Zheleznyakova GY; Piket E; Needhamsen M; Hagemann-Jensen M; Ekman D; Khademi M; Nimer FA; Scicluna P; Faridani O; Olsson T; Piehl F; Jagodic M, 2020, Profiling of small non-coding RNAs across cellular and biofluid compartments: implications for multiple sclerosis immunopathology, http://dx.doi.org/10.1101/2020.05.15.097519

Hagemann-Jensen M; Ziegenhain C; Chen P; Ramsköld D; Hendriks G-J; Larsson AJM; Faridani O; Sandberg R, 2019, Single-cell RNA counting at allele- and isoform-resolution using Smart-seq3, http://dx.doi.org/10.1101/817924

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