By Dr Abu Sina

Book Chapters

Ibn Sina AA; Koo KM; Ahmed M; Carrascosa LG; Trau M, 2018, 'Interfacial biosensing: Direct biosensing of biomolecules at the bare metal interface', in Encyclopedia of Interfacial Chemistry Surface Science and Electrochemistry, pp. 269 - 277, http://dx.doi.org/10.1016/B978-0-12-409547-2.14188-5

Journal articles

Choudhury A; Linne K; Bulfone TC; Hossain T; Sina AAI; Bickler PL; Fry BG; Lewin MR, 2025, 'Electrical Cell Impedance Sensing (ECIS): Feasibility of a Novel In Vitro Approach to Studying Venom Toxicity and Potential Therapeutics', Toxins, 17, http://dx.doi.org/10.3390/toxins17040193

Sheikh MR; Mahmud HH; Hossen MS; Saha D; Uddin ME; Hossain MF; Munshi MK; Sina AAI, 2025, 'Modeling the Interactions Between Chemicals and Proteins to Predict the Health Consequences of Air Pollution', International Journal of Environmental Research and Public Health, 22, http://dx.doi.org/10.3390/ijerph22030418

Uddin ME; Sheikh MR; Asaduzzaman M; Ahmed S; Kundu SK; Sina AAI, 2025, 'Identification and Characterization of a Protease Producing Bacillus cereus Strain From Tannery Waste for Efficient Dehairing of Goat Skin', Biomed Research International, 2025, http://dx.doi.org/10.1155/bmri/7639181

Jakaria Al-Mujahidy SKMD; Kryukov K; Ikeo K; Saito K; Uddin ME; Sina AAI, 2024, 'Functional genomic analysis of the isolated potential probiotic Lactobacillus delbrueckii subsp. indicus TY-11 and its comparison with other Lactobacillus delbrueckii strains', Microbiology Spectrum, 12, http://dx.doi.org/10.1128/spectrum.03470-23

Shanmugasundaram KB; Ahmed E; Miao X; Kulasinghe A; Fletcher JA; Monkman J; Mainwaring P; Masud MK; Park H; Hossain MSA; Yamauchi Y; Sina AAI; O’Byrne K; Wuethrich A; Trau M, 2024, 'A Mesoporous Gold Sensor Unveils Phospho PD-L1 in Extracellular Vesicles as a Proxy for PD-L1 Expression in Lung Cancer Tissue', ACS Sensors, 9, pp. 3009 - 3016, http://dx.doi.org/10.1021/acssensors.4c00192

Ahmed E; Masud MK; Komatineni P; Dey S; Lobb R; Hossain MSA; Möller A; Yamauchi Y; Sina AAI; Trau M, 2024, 'A mesoporous gold biosensor to investigate immune checkpoint protein heterogeneity in single lung cancer cells', Biosensors and Bioelectronics, 249, http://dx.doi.org/10.1016/j.bios.2023.115984

Khamis R; Shanmugasundaram KB; Zhou Q; Lu J; Zhang Z; Hill MM; Sina AAI; Trau M; Wuethrich A, 2023, 'Multiplex SERS-Lectin-Immunoassay for Esophageal Adenocarcinoma Screening', ACS Applied Nano Materials, 6, pp. 20190 - 20197, http://dx.doi.org/10.1021/acsanm.3c03987

Ahmed M; Wuethrich A; Constantin N; Shanmugasundaram KB; Mainwaring P; Kulasinghe A; O’Leary C; O’Byrne K; Sina AAI; Carrascosa LG; Trau M, 2023, 'Liquid Biopsy Snapshots of Key Phosphoproteomic Pathways in Lung Cancer Patients for Diagnosis and Therapy Monitoring', Analytical Chemistry, 95, pp. 8522 - 8532, http://dx.doi.org/10.1021/acs.analchem.3c00519

Li J; Sina AAI; Antaw F; Fielding D; Möller A; Lobb R; Wuethrich A; Trau M, 2023, 'Digital Decoding of Single Extracellular Vesicle Phenotype Differentiates Early Malignant and Benign Lung Lesions', Advanced Science, 10, http://dx.doi.org/10.1002/advs.202204207

Ahmed E; Shanmugasundaram KB; Li J; Behren A; Lobb R; Möller A; Wuethrich A; Dey S; Sina AAI; Trau M, 2023, 'A Microfluidic Liquid Biopsy Platform to Monitor Protein Biomarker Heterogeneity in Single Circulating Therapy‐Resistance Cancer Cell', Advanced Sensor Research, 2, http://dx.doi.org/10.1002/adsr.202300059

Dey S; Ahmed E; Somvanshi PS; Sina AAI; Wuethrich A; Trau M, 2022, 'An Electrochemical and Raman Scattering Dual Detection Biosensor for Rapid Screening and Biomolecular Profiling of Cancer Biomarkers', Chemosensors, 10, http://dx.doi.org/10.3390/chemosensors10030093

Constantin N; Sina AAI; Korbie D; Trau M, 2022, 'Opportunities for Early Cancer Detection: The Rise of ctDNA Methylation-Based Pan-Cancer Screening Technologies', Epigenomes, 6, http://dx.doi.org/10.3390/epigenomes6010006

Shanmugasundaram KB; Li J; Sina AI; Wuethrich A; Trau M, 2022, 'Toward precision oncology: SERS microfluidic systems for multiplex biomarker analysis in liquid biopsy', Materials Advances, 3, pp. 1459 - 1471, http://dx.doi.org/10.1039/d1ma00848j

Li J; Wuethrich A; Sina AAI; Cheng HH; Wang Y; Behren A; Mainwaring PN; Trau M, 2021, 'A digital single-molecule nanopillar SERS platform for predicting and monitoring immune toxicities in immunotherapy', Nature Communications, 12, http://dx.doi.org/10.1038/s41467-021-21431-w

Wang J; Wuethrich A; Lobb RJ; Antaw F; Sina AAI; Lane RE; Zhou Q; Zieschank C; Bell C; Bonazzi VF; Aoude LG; Everitt S; Yeo B; Barbour AP; Möller A; Trau M, 2021, 'Characterizing the Heterogeneity of Small Extracellular Vesicle Populations in Multiple Cancer Typesviaan Ultrasensitive Chip', ACS Sensors, 6, pp. 3182 - 3194, http://dx.doi.org/10.1021/acssensors.1c00358

Reza KK; Dey S; Wuethrich A; Jing Wang ; Behren A; Antaw F; Wang Y; Sina AAI; Trau M, 2021, 'In Situ Single Cell Proteomics Reveals Circulating Tumor Cell Heterogeneity during Treatment', ACS Nano, 15, pp. 11231 - 11243, http://dx.doi.org/10.1021/acsnano.0c10008

Wahab MA; Karim MR; Aijaz MO; Salahuddin B; Aziz S; Sina AAI, 2021, 'A study on the interfacial compatibility, microstructure and physico-chemical properties of polyimide/organically modified silica nanocomposite membrane', Polymers, 13, http://dx.doi.org/10.3390/polym13081328

Ali MY; Sina AAI; Khandker SS; Neesa L; Tanvir EM; Kabir A; Khalil MI; Gan SH, 2021, 'Nutritional composition and bioactive compounds in tomatoes and their impact on human health and disease: A review', Foods, 10, http://dx.doi.org/10.3390/foods10010045

Ahmed E; Masud MK; Hossain MSA; Na J; Sina AAI; Yamauchi Y; Trau M, 2020, 'Nanostructured mesoporous gold electrodes detect protein phosphorylation in cancer with electrochemical signal amplification', Analyst, 145, pp. 6639 - 6648, http://dx.doi.org/10.1039/d0an01096k

Sina AAI; Lin TY; Vaidyanathan R; Wang Z; Dey S; Wang J; Behren A; Wuethrich A; Carrascosa LG; Trau M, 2020, 'Methylation dependent gold adsorption behaviour identifies cancer derived extracellular vesicular DNA', Nanoscale Horizons, 5, pp. 1317 - 1323, http://dx.doi.org/10.1039/d0nh00258e

Kumar AR; Shanmugasundaram KB; Li J; Zhang Z; Ibn Sina AA; Wuethrich A; Trau M, 2020, 'Ultrasensitive melanoma biomarker detection using a microchip SERS immunoassay with anisotropic Au-Ag alloy nanoboxes', Rsc Advances, 10, pp. 28778 - 28785, http://dx.doi.org/10.1039/d0ra05032f

Khalil I; Yehye WA; Muhd Julkapli N; Sina AAI; Rahmati S; Basirun WJ; Seyfoddin A, 2020, 'Dual platform based sandwich assay surface-enhanced Raman scattering DNA biosensor for the sensitive detection of food adulteration', Analyst, 145, pp. 1414 - 1426, http://dx.doi.org/10.1039/c9an02106j

Wang J; Wuethrich A; Sina AAI; Lane RE; Lin LL; Wang Y; Cebon J; Behren A; Trau M, 2020, 'Tracking extracellular vesicle phenotypic changes enables treatment monitoring in melanoma', Science Advances, 6, http://dx.doi.org/10.1126/sciadv.aax3223

Wuethrich A; Rajkumar AR; Shanmugasundaram KB; Reza KK; Dey S; Howard CB; Sina AAI; Trau M, 2019, 'Single droplet detection of immune checkpoints on a multiplexed electrohydrodynamic biosensor', Analyst, 144, pp. 6914 - 6921, http://dx.doi.org/10.1039/c9an01450k

Sina AAI; Carrascosa LG; Trau M, 2019, 'DNA Methylation-Based Point-of-Care Cancer Detection: Challenges and Possibilities', Trends in Molecular Medicine, 25, pp. 955 - 966, http://dx.doi.org/10.1016/j.molmed.2019.05.014

Khondakar KR; Dey S; Wuethrich A; Sina AAI; Trau M, 2019, 'Toward Personalized Cancer Treatment: From Diagnostics to Therapy Monitoring in Miniaturized Electrohydrodynamic Systems', Accounts of Chemical Research, 52, pp. 2113 - 2123, http://dx.doi.org/10.1021/acs.accounts.9b00192

Khalil I; Yehye WA; Julkapli NM; Rahmati S; Sina AAI; Basirun WJ; Johan MR, 2019, 'Graphene oxide and gold nanoparticle based dual platform with short DNA probe for the PCR free DNA biosensing using surface-enhanced Raman scattering', Biosensors and Bioelectronics, 131, pp. 214 - 223, http://dx.doi.org/10.1016/j.bios.2019.02.028

Dey S; Vaidyanathan R; Reza KK; Wang J; Wang Y; Nel HJ; Law SC; Tyler J; Rossjohn J; Reid HH; Ibn Sina AA; Thomas R; Trau M, 2019, 'A microfluidic-SERSplatform for isolation and immuno-phenotyping of antigen specific T-cells', Sensors and Actuators B Chemical, 284, pp. 281 - 288, http://dx.doi.org/10.1016/j.snb.2018.12.099

Dey S; Koo KM; Wang Z; Sina AAI; Wuethrich A; Trau M, 2019, 'An integrated multi-molecular sensor for simultaneous BRAFV600E protein and DNA single point mutation detection in circulating tumour cells', Lab on A Chip, 19, pp. 738 - 748, http://dx.doi.org/10.1039/c8lc00991k

Sina AAI; Vaidyanathan R; Wuethrich A; Carrascosa LG; Trau M, 2019, 'Label-free detection of exosomes using a surface plasmon resonance biosensor', Analytical and Bioanalytical Chemistry, 411, pp. 1311 - 1318, http://dx.doi.org/10.1007/s00216-019-01608-5

Reza KK; Sina AAI; Wuethrich A; Grewal YS; Howard CB; Korbie D; Trau M, 2019, 'A SERS microfluidic platform for targeting multiple soluble immune checkpoints', Biosensors and Bioelectronics, 126, pp. 178 - 186, http://dx.doi.org/10.1016/j.bios.2018.10.044

Dey S; Kamil Reza K; Wuethrich A; Korbie D; Ibn Sina AA; Trau M, 2019, 'Tracking antigen specific T-cells: Technological advancement and limitations', Biotechnology Advances, 37, pp. 145 - 153, http://dx.doi.org/10.1016/j.biotechadv.2018.11.010

Sina AAI; Carrascosa LG; Liang Z; Grewal YS; Wardiana A; Shiddiky MJA; Gardiner RA; Samaratunga H; Gandhi MK; Scott RJ; Korbie D; Trau M, 2018, 'Epigenetically reprogrammed methylation landscape drives the DNA self-assembly and serves as a universal cancer biomarker', Nature Communications, 9, http://dx.doi.org/10.1038/s41467-018-07214-w

Reza KK; Dey S; Wuethrich A; Sina AAI; Korbie D; Wang Y; Trau M, 2018, 'Parallel profiling of cancer cells and proteins using a graphene oxide functionalized ac-EHD SERS immunoassay', Nanoscale, 10, pp. 18482 - 18491, http://dx.doi.org/10.1039/c8nr02886a

Wuethrich A; Sina AAI; Ahmed M; Lin TY; Carrascosa LG; Trau M, 2018, 'Interfacial nano-mixing in a miniaturised platform enables signal enhancement and: In situ detection of cancer biomarkers', Nanoscale, 10, pp. 10884 - 10890, http://dx.doi.org/10.1039/c7nr09496e

Sina AAI; Foster MT; Korbie D; Carrascosa LG; Shiddiky MJA; Gao J; Dey S; Trau M, 2017, 'A multiplex microplatform for the detection of multiple DNA methylation events using gold-DNA affinity', Analyst, 142, pp. 3573 - 3578, http://dx.doi.org/10.1039/c7an00611j

Ahmed M; Carrascosa LG; Ibn Sina AA; Zarate EM; Korbie D; Ru KL; Shiddiky MJA; Mainwaring P; Trau M, 2017, 'Detection of aberrant protein phosphorylation in cancer using direct gold-protein affinity interactions', Biosensors and Bioelectronics, 91, pp. 8 - 14, http://dx.doi.org/10.1016/j.bios.2016.12.012

Sina AAI; Vaidyanathan R; Dey S; Carrascosa LG; Shiddiky MJA; Trau M, 2016, 'Real time and label free profiling of clinically relevant exosomes', Scientific Reports, 6, http://dx.doi.org/10.1038/srep30460

Yadav S; Carrascosa LG; Sina AAI; Shiddiky MJA; Hill MM; Trau M, 2016, 'Electrochemical detection of protein glycosylation using lectin and protein-gold affinity interactions', Analyst, 141, pp. 2356 - 2361, http://dx.doi.org/10.1039/c6an00528d

Koo KM; Sina AAI; Carrascosa LG; Shiddiky MJA; Trau M, 2015, 'DNA-bare gold affinity interactions: Mechanism and applications in biosensing', Analytical Methods, 7, pp. 7042 - 7054, http://dx.doi.org/10.1039/c5ay01479d

Sina AAI; Al-Rafia SMI; Ahmad MF; Paul RK; Islam SMS; Younus M; Raithby PR; Ho CL; Lo YH; Liu L; Li H; Wong WY, 2015, 'Synthesis, Structures and Properties of Novel Platinum(II) Acetylide Complexes and Polymers with Tri(tolyl)phosphine as the Auxiliary Ligand', Journal of Inorganic and Organometallic Polymers and Materials, 25, pp. 427 - 436, http://dx.doi.org/10.1007/s10904-014-0071-7

Sultana T; Waheed CA; Islam SMS; Sina AAI; Younus M; Jabbar MA; Sabuj MRH, 2014, 'Synthesis, characterization and Electrochemical studies of Ferrocenyl-2, 4-Dinitrophenylhydrazone', Journal of Bangladesh Academy of Sciences, 38, pp. 177 - 187, http://dx.doi.org/10.3329/jbas.v38i2.21342

Koo KM; Sina AAI; Carrascosa LG; Shiddiky MJA; Trau M, 2014, 'Emethylsorb: Rapid quantification of DNA methylation in cancer cells on screen-printed gold electrodes', Analyst, 139, pp. 6178 - 6184, http://dx.doi.org/10.1039/c4an01641f

Sina AAI; Carrascosa LG; Palanisamy R; Rauf S; Shiddiky MJA; Trau M, 2014, 'Methylsorb: A simple method for quantifying DNA methylation using DNA-gold affinity interactions', Analytical Chemistry, 86, pp. 10179 - 10185, http://dx.doi.org/10.1021/ac502214z

Sina AAI; Howell S; Carrascosa LG; Rauf S; Shiddiky MJA; Trau M, 2014, 'eMethylsorb: Electrochemical quantification of DNA methylation at CpG resolution using DNA–gold affinity interactions', Chemical Communications, 50, pp. 13153 - 13156, http://dx.doi.org/10.1039/c4cc06732k

Carrascosa LG; Sina AAI; Palanisamy R; Sepulveda B; Otte MA; Rauf S; Shiddiky MJA; Trau M, 2014, 'Molecular inversion probe-based SPR biosensing for specific, label-free and real-time detection of regional DNA methylation', Chemical Communications, 50, pp. 3585 - 3588, http://dx.doi.org/10.1039/c3cc49607d

Conference Papers

Shiddiky MJA; Sina AAI; Carrascosa LG; Palanisamy R; Rauf S; Trau M, 2015, 'Methylsorb: A simple method for quantifying DNA methylation using DNA-gold affinity interactions', in 8th International Conference on Electrical and Computer Engineering Advancing Technology for A Better Tomorrow Icece 2014, pp. 17 - 20, http://dx.doi.org/10.1109/ICECE.2014.7027002

Theses / Dissertations

Sina AAI, Detecting DNA methylation at the gold interface: a gateway towards next generation cancer diagnostics, http://dx.doi.org/10.14264/699210

Preprints

Mujahidy SMJ; Ikeo K; Saito K; Ibn Sina DAA; Uddin ME, 2023, A Potential Novel Probiotic Strain and its Comparative Antagonism Evaluation with a Multi-Strain Probiotic Combination along with an Innovative Approach for Quantifying the Viable Microbiota, http://dx.doi.org/10.20944/preprints202311.1374.v1

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