Select Publications

Preprints

Zandavi SM; Liu D; Chung V; Anaissi A; Vafaee F, 2022, Fotomics: Fourier transform-based omics imagification for deep learning-based cell-identity mapping using single-cell omics profiles, http://dx.doi.org/10.1101/2022.07.08.499309

Khazaal A; Zandavi SM; Smolnikov A; Fatima S; Vafaee F, 2022, Pan-cancer Analyses reveal functional similarities of three lncRNAs across multiple tumors, http://dx.doi.org/10.1101/2022.03.14.22272396

Safarchi A; Fatima S; Ayati Z; Vafaee F, 2021, An Update on Novel Approaches for Diagnosis and Treatment of SARS-CoV-2 Infection, http://dx.doi.org/10.31219/osf.io/xg6z5

Shahriari S; Hossein Rashidi T; Azad AKM; Vafaee F, 2021, COVIDSpread: real-time prediction of COVID-19 spread based on time-series modelling, http://dx.doi.org/10.12688/f1000research.73969.1

Azad AKM; Fatima S; Vafaee F, 2020, An Integrative Resource for Network-Based Investigation of COVID-19 Combinatorial Drug Repositioning and Mechanism of Action, http://dx.doi.org/10.26434/chemrxiv.13271096

Batarseh AM; Vafaee F; Hosseini-Beheshti E; Chen A; Cohen A; Juillard A; Hunt NH; Mariani M; Mitchell T; Raymond Grau GE, 2020, Lipidome profiles of plasma microvesicles differ in experimental cerebral malaria, compared to malaria without neurological complications, http://dx.doi.org/10.1101/2020.07.28.224170

Azad AKM; Dinarvand M; Nematollahi A; Swift J; Lutze-Mann L; Vafaee F, 2020, A Comprehensive Integrated Drug Similarity Resource for In-Silico Drug Repositioning and Beyond, http://dx.doi.org/10.26434/chemrxiv.12376505.v1

Azad AKM; Dinarvand M; Nematollahi A; Swift J; Lutze-Mann L; Vafaee F, 2020, A Comprehensive Integrated Drug Similarity Resource for In-Silico Drug Repositioning and Beyond, http://dx.doi.org/10.26434/chemrxiv.12376505

Zandavi SM; Rashidi TH; Vafaee F, 2020, Forecasting the Spread of Covid-19 Under Control Scenarios Using LSTM and Dynamic Behavioral Models, http://dx.doi.org/10.48550/arxiv.2005.12270

Rashidi TH; Shahriari S; Azad AKM; Vafaee F, 2020, Real-time time-series modelling for prediction of COVID-19 spread and intervention assessment, http://dx.doi.org/10.1101/2020.04.24.20078923

Koch F; Sutton G; Voineagu I; Vafaee F, 2020, Supervised Application of Internal Validation Measures to Benchmark Dimensionality Reduction Methods in scRNA-seq Data, http://dx.doi.org/10.1101/2020.10.29.361451

Bayati M; Rabiee HR; Mehrbod M; Vafaee F; Ebrahimi D; Forrest A; Alinejad-Rokny H, 2018, CANCERSIGN: a user-friendly and robust tool for identification and classification of mutational signatures and patterns in cancer genomes, http://dx.doi.org/10.1101/424960

Ebrahimkhani S; Vafaee F; Hallal S; Wei H; Lee MYT; Young PE; Satgunaseelan L; Shivalingam B; Suter CM; Buckland ME; Kaufman KL, 2018, Deep sequencing of circulating exosomal microRNA allows non-invasive glioblastoma diagnosis, http://dx.doi.org/10.1101/342154


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