By Assistant Professor Paul Ekert

Journal articles

Brown LM; Tax G; Acera Mateos P; de Weck A; Foresto S; Robertson T; Jalud F; Ajuyah P; Barahona P; Mao J; Dolman MEM; Wong M; Mayoh C; Cowley MJ; Lau LMS; Sadras T; Ekert PG, 2025, 'A novel TRKB-activating internal tandem duplication characterizes a new mechanism of receptor tyrosine kinase activation', Npj Precision Oncology, 9, http://dx.doi.org/10.1038/s41698-025-00928-3

Shen Y; Mayoh C; Wee K; Pleasance E; Titmuss E; Corbett R; Williamson L; Krekhno Z; Nabbi A; Santiago R; Bianco S; Davidson S; Shlien A; Yuki KE; Connolly D; Morgenstern D; Bonakdar M; Taylor G; Csizmok V; Grisdale CJ; McConechy M; Xu J; Dupuis JH; Mungall K; Chuah E; Mungall A; Nelson J; Yip S; Sun S; Lim H; Renouf D; Laskin J; Cohen-Gogo S; Rassekh SR; Deyell RJ; Marra MA; Ekert PG; Jones SJM, 2025, 'Abstract A044: Immune profiling tools for adult and pediatric cancer: From whole genome and transcriptome sequencing to immunotherapy clinical trial design', Cancer Research, 85, pp. A044 - A044, http://dx.doi.org/10.1158/1538-7445.genfunc25-a044

Shembrey C; Yang R; Casan J; Hu W; Chen H; Singh GJ; Sadras T; Prasad K; Shortt J; Johnstone RW; Trapani JA; Ekert PG; Fareh M, 2024, 'Principles of CRISPR-Cas13 mismatch intolerance enable selective silencing of point-mutated oncogenic RNA with single-base precision', Science Advances, 10, http://dx.doi.org/10.1126/sciadv.adl0731

Staunton J; Ajuyah P; Harris A; Mayoh C; Wong M; Rumford M; Sullivan PJ; Ekert PG; Fuentes-Bolanos N; Cowley MJ; Lau LMS; Ziegler DS; Barahona P; Manoharan N, 2024, 'Novel paediatric case of a spinal high-grade astrocytoma with piloid features in a patient with Noonan Syndrome', Npj Precision Oncology, 8, http://dx.doi.org/10.1038/s41698-024-00734-3

Moujalled DM; Khaw SL; Sadras T; Pomilio G; Morley T; Litalien V; Ludlow L; Ekert PG; Hanna D, 2024, 'Co-Targeting BCL-2 and MCL1 (via CDK9) in Pre-Clinical Models of High-Risk Acute Lymphoblastic Leukemia', Blood, 144, pp. 1419 - 1419, http://dx.doi.org/10.1182/blood-2024-202757

Hu W; Kumar A; Ahmed SF; Qi S; Ma DKG; Chen H; Singh GJ; Casan JML; Haber M; Voskoboinik I; McKay MR; Trapani JA; Ekert PG; Fareh M, 2024, 'Single-base tiled screen unveils design principles of PspCas13b for potent and off-target-free RNA silencing', Nature Structural and Molecular Biology, 31, pp. 1702 - 1716, http://dx.doi.org/10.1038/s41594-024-01336-0

Dolman MEM; Ekert PG, 2024, 'Correction to: Functional precision medicine for pediatric cancers (Nature Medicine, (2024), 30, 4, (940-941), 10.1038/s41591-024-02863-5)', Nature Medicine, 30, pp. 2695, http://dx.doi.org/10.1038/s41591-024-03208-y

Smith K; O’Haire S; Markman B; Gan HK; O’Byrne K; Millward M; Tran B; Solomon BJ; Scott C; Kee D; McArthur G; Fellowes A; Khoung-Quang DAK; Ekert P; James P; Xu H; Martyn M; Lynch E; Weerasuriya R; Gaff C; Fox SB; Desai J, 2024, 'Patient Experience of Complex Genomic Sequencing Exploring Patient Preference, Barriers, and Enablers for Delivery', JCO Precision Oncology, 8, http://dx.doi.org/10.1200/PO.23.00247

Lau LMS; Khuong-Quang DA; Mayoh C; Wong M; Barahona P; Ajuyah P; Senapati A; Nagabushan S; Sherstyuk A; Altekoester AK; Fuentes-Bolanos NA; Yeung V; Sullivan A; Omer N; Diamond Y; Jessop S; Battaglia L; Zhukova N; Cui L; Lin A; Gifford AJ; Fleuren EDG; Dalla-Pozza L; Moore AS; Khaw SL; Eisenstat DD; Gottardo NG; Wood PJ; Tapp H; Alvaro F; McCowage G; Nicholls W; Hansford JR; Manoharan N; Kotecha RS; Mateos MK; Lock RB; Tyrrell V; Haber M; Trahair TN; Cowley MJ; Ekert PG; Marshall GM; Ziegler DS; Wong-Erasmus M, 2024, 'Precision-guided treatment in high-risk pediatric cancers', Nature Medicine, 30, pp. 1913 - 1922, http://dx.doi.org/10.1038/s41591-024-03044-0

Dolman MEM; Ekert PG, 2024, 'Functional precision medicine for pediatric cancers', Nature Medicine, 30, pp. 940 - 941, http://dx.doi.org/10.1038/s41591-024-02863-5

Kosasih HJ; Healey G; Brennan MS; Bjelosevic S; Sadras T; Jalud FB; Ibnat T; Ng AP; Mayoh C; Mao J; Tax G; Ludlow LEA; Johnstone RW; Herold MJ; Khaw SL; de Bock CE; Ekert PG, 2024, 'A novel MYB::PAIP1 oncogenic fusion in pediatric blastic plasmacytoid dendritic cell neoplasm (BPDCN) is dependent on BCL2 expression and is sensitive to venetoclax', Hemasphere, 8, pp. e1, http://dx.doi.org/10.1002/hem3.1

Sadras T; Brown L; Ekert P; Hawkins E; Salomon R; Kew K, 2024, '2011 – SUBCLONAL MUTATIONS ALTER CORE SIGNALLING NODES AND DRUG RESPONSES IN PAEDIATRIC ACUTE LYMPHOBLASTIC LEUKAEMIA', Experimental Hematology, 137, pp. 104568 - 104568, http://dx.doi.org/10.1016/j.exphem.2024.104568

Sadras T; Abdullah R; Ekert P; Ibnat T; Jalud F, 2024, '3153 – CRISPR-DIRECTED CHROMOSOMAL TRANSLOCATIONS PROVIDE NOVEL INSIGHTS INTO LEUKEMIA BIOLOGY', Experimental Hematology, 137, pp. 104474 - 104474, http://dx.doi.org/10.1016/j.exphem.2024.104474

Krysiak K; Saliba J; Kesserwan C; Akkari Y; Ewalt MD; Iacobucci I; Campregher P; Ekert PG; Bhojwani D; Corson LB; Mehta N; Golem S; Kanagal-Shamanna R; Kovach AE; Lee K; Danos A; Helber H; Gurbuxani S; Harrison CJ; Jain N; Nardi V; Reshmi SC; Seifi M; Roberts K; Rouette A; Shukla N; Stock W; Xu X; Zhang L; Zhong Y; Zhao X; Baughn LB; Terraf P; Griffith OL; Griffith M; Raca G; Evans MG; Mullighan C, 2024, '57. Developing oncogenicity guidelines for BCR::ABL1-like B-lymphoblastic leukemia/lymphoma through expert consensus', Cancer Genetics, 286-287, pp. S18 - S19, http://dx.doi.org/10.1016/j.cancergen.2024.08.059

Gu A; Schmidt B; Lonsdale A; Jalaldeen R; Kosasih HJ; Brown LM; Sadras T; Ekert PG; Oshlack A, 2023, 'TALLSorts: a T-cell acute lymphoblastic leukemia subtype classifier using RNA-seq expression data', Blood Advances, 7, pp. 7402 - 7406, http://dx.doi.org/10.1182/bloodadvances.2023010385

Mayoh C; Gifford AJ; Terry R; Lau LMS; Wong M; Rao P; Shai-Hee T; Saletta F; Khuong-Quang DA; Qin V; Mateos MK; Meyran D; Miller KE; Yuksel A; Mould EVA; Bowen-James R; Govender D; Senapati A; Zhukova N; Omer N; Dholaria H; Alvaro F; Tapp H; Diamond Y; Pozza LD; Moore AS; Nicholls W; Gottardo NG; McCowage G; Hansford JR; Khaw SL; Wood PJ; Catchpoole D; Cottrell CE; Mardis ER; Marshall GM; Tyrrell V; Haber M; Ziegler DS; Vittorio O; Trapani JA; Cowley MJ; Neeson PJ; Ekert PG, 2023, 'A novel transcriptional signature identifies T-cell infiltration in high-risk paediatric cancer', Genome Medicine, 15, http://dx.doi.org/10.1186/s13073-023-01170-x

Ajuyah P; Mayoh C; Lau LMS; Barahona P; Wong M; Chambers H; Valdes-Mora F; Senapati A; Gifford AJ; D’Arcy C; Hansford JR; Manoharan N; Nicholls W; Williams MM; Wood PJ; Cowley MJ; Tyrrell V; Haber M; Ekert PG; Ziegler DS; Khuong-Quang DA; Valdes Mora F, 2023, 'Histone H3-wild type diffuse midline gliomas with H3K27me3 loss are a distinct entity with exclusive EGFR or ACVR1 mutation and differential methylation of homeobox genes', Scientific Reports, 13, pp. 3775, http://dx.doi.org/10.1038/s41598-023-30395-4

Daniel P; Sun CX; Bradshaw G; Shi H; Loi M; Chew N; Parackal S; Tsui V; Liang Y; Koptyra M; Adjumain S; Sun C; Chong WC; Fernando D; Drinkwater C; Tourchi M; Habarakada D; Carvalho D; Storm PB; Baubet V; Sayles LC; Fernandez E; Zhukova N; Dun MD; Ludlow LE; Day B; Stringer BW; Neeman N; Rubens JA; Raabe EH; Vinci M; Tyrrell V; Fletcher JI; Ekert PG; Dumevska B; Ziegler DS; Tsoli M; Sulaiman NFS; Loh AHP; Low SYY; Sweet-Cordero EA; Monje M; Resnick A; Jones C; Downie P; Williams B; Rosenbluh J; Gough D; Cain JE; Firestein R, 2023, 'SYST-15 GENERATION AND MULTI-DIMENSIONAL PROFILING OF A CHILDHOOD CANCER CELL LINE ATLAS DEFINES NEW THERAPEUTIC OPPORTUNITIES', Neuro-Oncology Advances, 5, pp. iii30 - iii30, http://dx.doi.org/10.1093/noajnl/vdad070.119

Kan WL; Dhagat U; Kaufmann KB; Hercus TR; Nero TL; Zeng AGX; Toubia J; Barry EF; Broughton SE; Gomez GA; Benard BA; Dottore M; Cheung Tung Shing KS; Boutzen H; Samaraweera SE; Simpson KJ; Jin L; Goodall GJ; Begley CG; Thomas D; Ekert PG; Tvorogov D; D’andrea RJ; Dick JE; Parker MW; Lopez AF, 2023, 'Distinct Assemblies of Heterodimeric Cytokine Receptors Govern Stemness Programs in Leukemia', Cancer Discovery, 13, pp. 1922 - 1947, http://dx.doi.org/10.1158/2159-8290.CD-22-1396

Mayoh C; Mao J; Xie J; Tax G; Chow SO; Cadiz R; Pazaky K; Barahona P; Ajuyah P; Trebilcock P; Malquori A; Gunther K; Avila A; Yun DY; Alfred S; Gopalakrishnan A; Kamili A; Wong M; Cowley MJ; Jessop S; Lau LMS; Trahair TN; Ziegler DS; Fletcher JI; Gifford AJ; Tsoli M; Marshall GM; Haber M; Tyrrell V; Failes TW; Arndt GM; Lock RB; Ekert PG; M Dolman ME; Wong-Erasmus M; Ajuyah P, 2023, 'High-Throughput Drug Screening of Primary Tumor Cells Identifies Therapeutic Strategies for Treating Children with High-Risk Cancer', Cancer Research, 83, pp. 2716 - 2732, http://dx.doi.org/10.1158/0008-5472.CAN-22-3702

Brown LM; Ekert PG; Fleuren EDG, 2023, 'Biological and clinical implications of FGFR aberrations in paediatric and young adult cancers', Oncogene, 42, pp. 1875 - 1888, http://dx.doi.org/10.1038/s41388-023-02705-7

Sun CX; Daniel P; Bradshaw G; Shi H; Loi M; Chew N; Parackal S; Tsui V; Liang Y; Koptyra M; Adjumain S; Sun C; Chong WC; Fernando D; Drinkwater C; Tourchi M; Habarakada D; Sooraj D; Carvalho D; Storm PB; Baubet V; Sayles LC; Fernandez E; Nguyen T; Pörksen M; Doan A; Crombie DE; Panday M; Zhukova N; Dun MD; Ludlow LE; Day B; Stringer BW; Neeman N; Rubens JA; Raabe EH; Vinci M; Tyrrell V; Fletcher JI; Ekert PG; Dumevska B; Ziegler DS; Tsoli M; Syed Sulaiman NF; Loh AHP; Low SYY; Sweet-Cordero EA; Monje M; Resnick A; Jones C; Downie P; Williams B; Rosenbluh J; Gough D; Cain JE; Firestein R, 2023, 'Generation and multi-dimensional profiling of a childhood cancer cell line atlas defines new therapeutic opportunities', Cancer Cell, 41, pp. 660 - 677.e7, http://dx.doi.org/10.1016/j.ccell.2023.03.007

Meyran D; Zhu JJ; Butler J; Tantalo D; MacDonald S; Nguyen TN; Wang M; Thio N; D’Souza C; Qin VM; Slaney C; Harrison A; Sek K; Petrone P; Thia K; Giuffrida L; Scott AM; Terry RL; Tran B; Desai J; Prince HM; Harrison SJ; Beavis PA; Kershaw MH; Solomon B; Ekert PG; Trapani JA; Darcy PK; Neeson PJ, 2023, 'TSTEM-like CAR-T cells exhibit improved persistence and tumor control compared with conventional CAR-T cells in preclinical models', Science Translational Medicine, 15, http://dx.doi.org/10.1126/scitranslmed.abk1900

Neeson PJ; Ekert PG, 2023, 'Harnessing immune checkpoint trial data in pediatric cancer', Nature Cancer, 4, pp. 444 - 446, http://dx.doi.org/10.1038/s43018-023-00540-z

Sadras T; Jalud FB; Kosasih HJ; Horne CR; Brown LM; El-Kamand S; de Bock CE; McAloney L; Ng AP; Davidson NM; Ludlow LEA; Oshlack A; Cowley MJ; Khaw SL; Murphy JM; Ekert PG, 2023, 'Unusual PDGFRB fusion reveals novel mechanism of kinase activation in Ph-like B-ALL', Leukemia, 37, pp. 1 - 5, http://dx.doi.org/10.1038/s41375-023-01843-x

Ryland GL; Umeda M; Holmfeldt L; Lehmann S; Herlin MK; Ma J; Khanlari M; Rubnitz JE; Ries RE; Kosasih HJ; Ekert PG; Goh HN; Tiong IS; Grimmond SM; Haferlach C; Day RB; Ley TJ; Meshinchi S; Ma X; Blombery P; Klco JM, 2023, 'Description of a novel subtype of acute myeloid leukemia defined by recurrent CBFB insertions', Blood, 141, pp. 800 - 805, http://dx.doi.org/10.1182/blood.2022017874

Whitehouse JP; Hii H; Mayoh C; Wong M; Ajuyah P; Barahona P; Cui L; Dholaria H; White CL; Buntine MK; Byrne J; Rodrigues da Silva K; Howlett M; Girard EJ; Tsoli M; Ziegler DS; Dyke JM; Lee S; Ekert PG; Cowley MJ; Gottardo NG; Endersby R, 2023, 'In vivo loss of tumorigenicity in a patient-derived orthotopic xenograft mouse model of ependymoma', Frontiers in Oncology, 13, http://dx.doi.org/10.3389/fonc.2023.1123492

Lonsdale A; Halman A; Brown L; Kosasih H; Ekert P; Oshlack A, 2023, 'Toblerone: detecting exon deletion events in cancer using RNA-seq', F1000research, 12, http://dx.doi.org/10.12688/f1000research.129490.1

Davidson NM; Chen Y; Sadras T; Ryland GL; Blombery P; Ekert PG; Göke J; Oshlack A, 2022, 'JAFFAL: detecting fusion genes with long-read transcriptome sequencing', Genome Biology, 23, http://dx.doi.org/10.1186/s13059-021-02588-5

Rao P; Furst L; Meyran D; Mayoh C; Neeson PJ; Terry R; Khuong-Quang DA; Mantamadiotis T; Ekert PG, 2022, 'Advances in CAR T cell immunotherapy for paediatric brain tumours', Frontiers in Oncology, 12, http://dx.doi.org/10.3389/fonc.2022.873722

Schmidt B; Brown LM; Ryland GL; Lonsdale A; Kosasih HJ; Ludlow LE; Majewski IJ; Blombery P; Ekert PG; Davidson NM; Oshlack A, 2022, 'ALLSorts: an RNA-Seq subtype classifier for B-cell acute lymphoblastic leukemia', Blood Advances, 6, pp. 4093 - 4097, http://dx.doi.org/10.1182/bloodadvances.2021005894

Lewis AC; Pope VS; Tea MN; Li M; Nwosu GO; Nguyen TM; Wallington-Beddoe CT; Moretti PAB; Anderson D; Creek DJ; Costabile M; Ali SR; Thompson-Peach CAL; Dredge BK; Bert AG; Goodall GJ; Ekert PG; Brown AL; D'Andrea R; Robinson N; Pitman MR; Thomas D; Ross DM; Gliddon BL; Powell JA; Pitson SM, 2022, 'Ceramide-induced integrated stress response overcomes Bcl-2 inhibitor resistance in acute myeloid leukemia', Blood, 139, pp. 3737 - 3751, http://dx.doi.org/10.1182/blood.2021013277

Kimura S; Montefiori L; Iacobucci I; Zhao Y; Gao Q; Paietta EM; Haferlach C; Laird AD; Mead PE; Gu Z; Stock W; Litzow M; Rowe JM; Luger SM; Hunger SP; Ryland GL; Schmidt B; Ekert PG; Oshlack A; Grimmond SM; Rehn J; Breen J; Yeung D; White DL; Aldoss I; Jabbour EJ; Pui CH; Meggendorfer M; Walter W; Kern W; Haferlach T; Brady S; Zhang J; Roberts KG; Blombery P; Mullighan CG, 2022, 'Enhancer retargeting of CDX2 and UBTF::ATXN7L3 define a subtype of high-risk B-progenitor acute lymphoblastic leukemia', Blood, 139, pp. 3519 - 3531, http://dx.doi.org/10.1182/blood.2022015444

Daniel P; Sun C; Koptyra M; Drinkwater C; Chew N; Bradshaw G; Loi M; Shi C; Tourchi M; Parackal S; Chong WC; Fernando D; Adjumain S; Nguyen H; Habarakada D; Sooraj D; Crombie D; Zhukova N; Jones C; Rubens J; Raabe E; Vinci M; Dun M; Ludlow L; Nazarian J; Fletcher J; Ekert P; Ziegler D; Loh AHP; Low SYY; Monje M; Neeman N; Williams B; Resnick A; Gough D; Cain J; Firestein R, 2022, 'MODL-17. The Childhood Brain Cancer Cell Line Atlas: A Resource for Biomarker Identification and Therapeutic Development', Neuro-Oncology, 24, pp. i172 - i172, http://dx.doi.org/10.1093/neuonc/noac079.640

Brown LM; Hediyeh-Zadeh S; Sadras T; Huckstep H; Sandow JJ; Bartolo RC; Kosasih HJ; Davidson NM; Schmidt B; Bjelosevic S; Johnstone R; Webb AI; Khaw SL; Oshlack A; Davis MJ; Ekert PG, 2022, 'SFPQ-ABL1 and BCR-ABL1 use different signaling networks to drive B-cell acute lymphoblastic leukemia', Blood Advances, 6, pp. 2373 - 2387, http://dx.doi.org/10.1182/bloodadvances.2021006076

Lau LMS; Mayoh C; Xie J; Barahona P; MacKenzie KL; Wong M; Kamili A; Tsoli M; Failes TW; Kumar A; Mould EVA; Gifford A; Chow SO; Pinese M; Fletcher JI; Arndt GM; Khuong-Quang DA; Wadham C; Batey D; Eden G; Trebilcock P; Joshi S; Alfred S; Gopalakrishnan A; Khan A; Grebert Wade D; Strong PA; Manouvrier E; Morgan LT; Span M; Lim JY; Cadiz R; Ung C; Thomas DM; Tucker KM; Warby M; McCowage GB; Dalla-Pozza L; Byrne JA; Saletta F; Fellowes A; Fox SB; Norris MD; Tyrrell V; Trahair TN; Lock RB; Cowley MJ; Ekert PG; Haber M; Ziegler DS; Marshall GM; Trahair T, 2022, 'In vitro and in vivo drug screens of tumor cells identify novel therapies for high-risk child cancer', EMBO Molecular Medicine, 14, pp. emmm202114608, http://dx.doi.org/10.15252/emmm.202114608

Manoharan N; Ajuyah P; Senapati A; Wong M; Mullins A; Rodriguez M; Doyle H; McCowage G; Lau LMS; Ekert PG; Ziegler DS, 2021, 'Diffuse leptomeningeal glioneuronal tumour (DLGNT) in children: the emerging role of genomic analysis', Acta Neuropathologica Communications, 9, http://dx.doi.org/10.1186/s40478-021-01248-w

Nagabushan S; Lau LMS; Barahona P; Wong M; Sherstyuk A; Marshall GM; Tyrrell V; Wegner EA; Ekert PG; Cowley MJ; Mayoh C; Trahair TN; Crowe P; Anazodo A; Ziegler DS, 2021, 'Efficacy of MEK inhibition in a recurrent malignant peripheral nerve sheath tumor', Npj Precision Oncology, 5, http://dx.doi.org/10.1038/s41698-021-00145-8

Fleuren EDG; Terry RL; Meyran D; Omer N; Trapani JA; Haber M; Neeson PJ; Ekert PG, 2021, 'Enhancing the potential of immunotherapy in paediatric sarcomas: Breaking the immunosuppressive barrier with receptor tyrosine kinase inhibitors', Biomedicines, 9, pp. 1798, http://dx.doi.org/10.3390/biomedicines9121798

Cmero M; Schmidt B; Majewski IJ; Ekert PG; Oshlack A; Davidson NM, 2021, 'MINTIE: identifying novel structural and splice variants in transcriptomes using RNA-seq data', Genome Biology, 22, http://dx.doi.org/10.1186/s13059-021-02507-8

Fordham AM; Ekert PG; Fleuren EDG, 2021, 'Precision medicine and phosphoproteomics for the identification of novel targeted therapeutic avenues in sarcomas', Biochimica Et Biophysica Acta Reviews on Cancer, 1876, http://dx.doi.org/10.1016/j.bbcan.2021.188613

Fareh M; Zhao W; Hu W; Casan JML; Kumar A; Symons J; Zerbato JM; Fong D; Voskoboinik I; Ekert PG; Rudraraju R; Purcell DFJ; Lewin SR; Trapani JA, 2021, 'Reprogrammed CRISPR-Cas13b suppresses SARS-CoV-2 replication and circumvents its mutational escape through mismatch tolerance', Nature Communications, 12, http://dx.doi.org/10.1038/s41467-021-24577-9

Ryland GL; Bajel A; Dickinson M; Ekert PG; Hofmann O; Jzerman M; Ng AP; Oshlack A; Schmidt B; Tiong IS; Vu M; Westerman DA; Grimmond S; Blombery P, 2021, 'Diagnostic Utility of Multimodal Genomic Profiling for Molecular Classification and MRD Assessment in Adult B-Cell Acute Lymphoblastic Leukemia', BLOOD, 138, http://dx.doi.org/10.1182/blood-2021-146396

Khaw SL; Ekert P, 2021, 'Cycling without brakes lets ALL escape', Blood, 138, pp. 1912 - 1913, http://dx.doi.org/10.1182/blood.2021012754

Meyran D; Terry RL; Zhu JJ; Haber M; Ziegler DS; Ekert PG; Trapani JA; Darcy PK; Neeson PJ, 2021, 'Early-phenotype CAR-T cells for the treatment of pediatric cancers', Annals of Oncology, 32, pp. 1366 - 1380, http://dx.doi.org/10.1016/j.annonc.2021.07.018

Terry RL; Meyran D; Fleuren EDG; Mayoh C; Zhu J; Omer N; Ziegler DS; Haber M; Darcy PK; Trapani JA; Neeson PJ; Ekert PG, 2021, 'Chimeric antigen receptor t cell therapy and the immunosuppressive tumor microenvironment in pediatric sarcoma', Cancers, 13, pp. 4704, http://dx.doi.org/10.3390/cancers13184704

Oshlack A; Schmidt B; Cmero M; Ekert P; Davidson N, 2021, 'Slinker: Visualising novel splicing events in RNA-Seq data', F1000research, 10, http://dx.doi.org/10.12688/f1000research.74836.1

Subhash VV; Huang L; Kamili A; Wong M; Chen D; Venn NC; Atkinson C; Mayoh C; Venkat P; Tyrrell V; Marshall GM; Cowley MJ; Ekert PG; Norris MD; Haber M; Henderson MJ; Sutton R; Fletcher JI; Trahair TN; Vijayasubhash V, 2021, 'Whole-genome sequencing facilitates patient-specific quantitative PCR-based minimal residual disease monitoring in acute lymphoblastic leukaemia, neuroblastoma and Ewing sarcoma', British Journal of Cancer, 126, pp. 482 - 491, http://dx.doi.org/10.1038/s41416-021-01538-z

Schmidt B; Brown L; Ryland G; Lonsdale A; Kosasih H; Ludlow L; Majewski I; Blombery P; Ekert P; Davidson N; Oshlack A, 2021, 'ALLSorts: a RNA-Seq classifier for B-Cell Acute Lymphoblastic Leukemia', , http://dx.doi.org/10.1101/2021.08.01.454393

Davidson N; Chen Y; Sadras T; Ryland G; Blombery P; Ekert P; Göke J; Oshlack A, 2021, 'JAFFAL: Detecting fusion genes with long read transcriptome sequencing', , http://dx.doi.org/10.1101/2021.04.26.441398

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