By Professor Raina MacIntyre

Journal articles

Steinhöfel KK; Heslop D; MacIntyre CR, 2025, 'Agent-Based Models of Virus Infection', Current Clinical Microbiology Reports, 12, http://dx.doi.org/10.1007/s40588-024-00238-5

Mahmoud MMA; Bahl P; de AFV; Maclntyre CR; Green D; Doolan C; de Silva C, 2025, 'An infection risk model for estimating infection probability and occupancy time: A CFD approach with aerosol measurements', Building and Environment, 279, http://dx.doi.org/10.1016/j.buildenv.2025.113035

Tawfiq E; Chen R; Honeyman DA; Dawson R; Kunasekaran M; Notaras A; Gurdasani D; Skouteris H; Ayton D; MacIntyre CR, 2025, 'Long Covid Symptom Clusters, Correlates and Predictors in a Highly Vaccinated Australian Population in 2023', Health Expectations, 28, http://dx.doi.org/10.1111/hex.70273

Ewing AG; Joffe D; Blitshteyn S; Brooks AES; Wist J; Bar-Yam Y; Bilodeau S; Curtin J; Duncan R; Faghy M; Galland L; Pretorius E; Salamon S; Buonsenso D; Hastie C; Kane B; Khan MA; Lal A; Lau D; MacIntyre R; McFarland S; Munblit D; Nicholson J; Ollila HM; Putrino D; Rosario A; Tan T, 2025, 'Long COVID clinical evaluation, research and impact on society: a global expert consensus', Annals of Clinical Microbiology and Antimicrobials, 24, pp. 27, http://dx.doi.org/10.1186/s12941-025-00793-9

Strickling M; Zarif N; Nguyen H; Khalaj SM; MacIntyre CR; Packard R; Selvaduray G; Wang Y, 2025, 'A comparison of fit, heat stress, oxygen saturation and comfort between a novel reusable mask and disposable N95 respirator', Plos One, 20, http://dx.doi.org/10.1371/journal.pone.0321538

Akhtar Z; Moa AM; Tan TC; Fröbert O; Menzies R; MacIntyre CR, 2025, 'Prevention of Cardiovascular Diseases with Standard-Dose Quadrivalent Influenza Vaccine in People Aged ≥50 Years in Australia During the 2017 A/H3N2 Epidemic', Vaccines, 13, http://dx.doi.org/10.3390/vaccines13040407

Jindal M; Stone H; Lim S; MacIntyre CR, 2025, 'A Geospatial Perspective Toward the Role of Wild Bird Migrations and Global Poultry Trade in the Spread of Highly Pathogenic Avian Influenza H5N1', Geohealth, 9, http://dx.doi.org/10.1029/2024GH001296

Quigley AL; Kunasekaran M; Stone H; Honeyman D; Notaras A; Lim S; MacIntyre R, 2025, 'The impact of the cruise ship Coral Princess on COVID-19 transmission in regional Western Australia in 2022', Journal of Travel Medicine, 32, http://dx.doi.org/10.1093/jtm/taae044

MacIntyre CR, 2025, 'Thinking globally for pandemic early warning systems: Infectious diseases', Nature Medicine, 31, pp. 731 - 732, http://dx.doi.org/10.1038/s41591-024-03460-2

Body A; Lal L; Srihari S; MacIntyre CR; Buttery J; Ahern ES; Opat S; Leahy MF; Hamad N; Milch V; Turville S; Smith C; Lineburg K; Naing Z; Rawlinson W; Segelov E, 2025, 'Comprehensive humoral and cellular immune responses to COVID-19 vaccination in adults with cancer', Vaccine, 46, http://dx.doi.org/10.1016/j.vaccine.2024.126547

Li X; Ding P; Deng F; Mao Y; Zhou L; Ding C; Wang Y; Luo Y; Zhou Y; MacIntyre CR; Tang S; Xu D; Shi X, 2025, 'Corrigendum to “Wearing time and respiratory volume affect the filtration efficiency of masks against aerosols at different sizes” [Environ. Technol. Innov. 25 (2022) 102165] (Environmental Technology & Innovation (2022) 25, (S2352186421007720), (10.1016/j.eti.2021.102165))', Environmental Technology and Innovation, 37, http://dx.doi.org/10.1016/j.eti.2025.104056

Honeyman D; Gurdasani D; Notaras A; Akhtar Z; Edgeworth J; Moa A; Chughtai AA; Quigley A; Lim S; MacIntyre CR, 2025, 'Global Epidemiology of Outbreaks of Unknown Cause Identified by Open-Source Intelligence, 2020–2022', Emerging Infectious Diseases, 31, pp. 298 - 308, http://dx.doi.org/10.3201/eid3102.240533

Honeyman D; Muluneh AG; Kalyar F; Macintyre CR, 2025, 'Biowarfare scare: Pakistani judges under threat from suspicious substance', Global Biosecurity, 7, http://dx.doi.org/10.31646/gbio.271

Honeyman D; Heslop D; Macintyre CR, 2025, 'Deadly Mass Methanol Poisoning in Laos, 2024', Global Biosecurity, 7, http://dx.doi.org/10.31646/gbio.310

MacIntyre CR; Akhtar Z; Moa A, 2025, 'Corrigendum to “Influenza B/Yamagata - extinct, eradicated or hiding? [Vaccine 42/26 (2024) 126450]” (Vaccine (2025) 44, (S0264410X24011320), (10.1016/j.vaccine.2024.126450))', Vaccine, 44, http://dx.doi.org/10.1016/j.vaccine.2024.126486

MacIntyre CR; Akhtar Z; Moa A, 2025, 'Influenza B/Yamagata cannot currently be declared extinct', Vaccine, 44, http://dx.doi.org/10.1016/j.vaccine.2024.126450

MacIntyre CR, 2025, 'Overall cardioprotective effects of COVID mRNA vaccines', European Heart Journal, 46, pp. 158 - 160, http://dx.doi.org/10.1093/eurheartj/ehae800

Zhang P; Raina MacIntyre C; Chen X; Chughtai AA, 2025, 'Application of the Modified Grunow-Finke Risk Assessment Tool to the Sverdlovsk Anthrax Outbreak of 1979', Military Medicine, 190, pp. e59 - e66, http://dx.doi.org/10.1093/milmed/usae289

Muluneh AG; Moa A; Lim S; MacIntyre CR, 2025, 'Mapping biosafety level 3 (BSL-3) and BSL-4 laboratories for public health threats reduction', Journal of Public Health (Germany), http://dx.doi.org/10.1007/s10389-025-02492-3

Macintyre CR; Chughtai AA; Kunasekaran M; Tawfiq E; Greenhalgh T, 2025, 'The role of masks and respirators in preventing respiratory infections in healthcare and community settings', BMJ, http://dx.doi.org/10.1136/bmj-2023-078573

Ding DH; Quigley MA; MacIntyre PR, 2025, 'Analysing Open-source Images to Assess Face Mask Usage for Epidemiological Studies', International Journal of Infectious Diseases, 152, pp. 107407 - 107407, http://dx.doi.org/10.1016/j.ijid.2024.107407

Quigley DA; Honeyman MD; Lim APS; MacIntyre PCR, 2025, 'Enhanced surveillance of a pneumonia outbreak of unknown cause in Argentina in 2022 using the AI system, EPIWATCH', International Journal of Infectious Diseases, 152, pp. 107571 - 107571, http://dx.doi.org/10.1016/j.ijid.2024.107571

Quigley DA; Honeyman MD; Stone MH; Dawson DR; MacIntyre PCR, 2025, 'EPIWATCH, an artificial intelligence early-warning system as a valuable tool in outbreak surveillance', International Journal of Infectious Diseases, 152, pp. 107579 - 107579, http://dx.doi.org/10.1016/j.ijid.2024.107579

Gurdasani D; Trent M; Ziauddeen H; Mnatzaganian E; Turville S; Chen X; Kunasekaran MP; Chughtai AA; Moa A; Mceniery J; Greenhalgh T; Macintyre CR, 2024, 'Acute hepatitis of unknown aetiology in children: evidence for and against causal relationships with SARS-CoV-2, HAdv and AAV2', BMJ Paediatrics Open, 8, http://dx.doi.org/10.1136/bmjpo-2023-002410

Costantino V; MacIntyre CR, 2024, 'Impact of vaccine coverage and disruption to health services on COVID-19 in Ukraine', Scientific Reports, 14, http://dx.doi.org/10.1038/s41598-024-57447-7

Berry MT; Khan SR; Schlub TE; Notaras A; Kunasekaran M; Grulich AE; MacIntyre CR; Davenport MP; Khoury DS, 2024, 'Predicting vaccine effectiveness for mpox', Nature Communications, 15, pp. 3856, http://dx.doi.org/10.1038/s41467-024-48180-w

Kalyar F; Chen X; Chughtai AA; MacIntyre CR, 2024, 'Origin of the H1N1 (Russian influenza) pandemic of 1977—A risk assessment using the modified Grunow–Finke tool (mGFT)', Risk Analysis, 44, pp. 2696 - 2706, http://dx.doi.org/10.1111/risa.14343

Shrestha A; Chen R; Kunasekaran M; Honeyman D; Notaras A; Sutton B; Quigley A; MacIntyre CR, 2024, 'The risk of cognitive decline and dementia in older adults diagnosed with COVID-19: A systematic review and meta-analysis', Ageing Research Reviews, 101, http://dx.doi.org/10.1016/j.arr.2024.102448

Soh SE; Ayton D; Bevins A; Skouteris H; Trent M; MacIntyre R, 2024, 'Attitudes and Behaviours Regarding COVID-19 Mitigation Strategies in Australians With an Underlying Health Condition: A Cross-Sectional Study', Health Expectations, 27, pp. e70025, http://dx.doi.org/10.1111/hex.70025

Bahl P; Bhattacharjee S; MacIntyre R; Doolan C; de Silva C, 2024, 'Experimental framework to examine turbulent puffs generated by human coughing', Physics of Fluids, 36, http://dx.doi.org/10.1063/5.0225782

Hutchinson D; Li B; Lim S; Stone H; MacIntyre CR, 2024, 'Using EPIWATCH® open-source surveillance to describe the epidemiology of lumpy skin disease outbreaks in South and Southeast Asia (2022–2023)', Australian Veterinary Journal, 102, pp. 524 - 529, http://dx.doi.org/10.1111/avj.13362

Benedict Kpozehouen E; Raina Macintyre C; Tan TC, 2024, 'Coverage of influenza, pneumococcal and zoster vaccination and determinants of influenza and pneumococcal vaccination among adults with cardiovascular diseases in community', Vaccine, 42, http://dx.doi.org/10.1016/j.vaccine.2024.05.051

Mahmoud MMA; Bahl P; V de A Aquino AF; Maclntyre CR; Bhattacharjee S; Green D; Cooper N; Doolan C; de Silva C; MacIntyre R, 2024, 'A numerical framework for the analysis of indoor air quality in a classroom', Journal of Building Engineering, 92, pp. 109659, http://dx.doi.org/10.1016/j.jobe.2024.109659

Kannan A; Chen R; Akhtar Z; Sutton B; Quigley A; Morris MJ; MacIntyre CR, 2024, 'Use of Open-Source Epidemic Intelligence for Infectious Disease Outbreaks, Ukraine, 2022', Emerging Infectious Diseases, 30, pp. 1865 - 1871, http://dx.doi.org/10.3201/eid3009.240082

Costantino V; Grafton Q; Kompas T; Chu L; Honeyman D; Notaras A; MacIntyre CR, 2024, 'The public health and economic burden of long COVID in Australia, 2022–24: a modelling study', Medical Journal of Australia, 221, pp. 217 - 223, http://dx.doi.org/10.5694/mja2.52400

Chen X; Kalyar F; Chughtai AA; MacIntyre CR, 2024, 'Use of a risk assessment tool to determine the origin of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)', Risk Analysis, 44, pp. 1896 - 1906, http://dx.doi.org/10.1111/risa.14291

Züfle A; Salim F; Anderson T; Scotch M; Xiong L; Sokol K; Xue H; Kong R; Heslop D; Paik HY; Macintyre CR, 2024, 'Leveraging Simulation Data to Understand Bias in Predictive Models of Infectious Disease Spread', ACM Transactions on Spatial Algorithms and Systems, 10, http://dx.doi.org/10.1145/3660631

Aleem MA; Chughtai AA; Rahman B; Akhtar Z; Chowdhury F; Qadri F; Macintyre CR, 2024, 'Prevalence of influenza and other acute respiratory illnesses in patients with acute myocardial infarction in Bangladesh: A cross-sectional study', Health Science Reports, 7, http://dx.doi.org/10.1002/hsr2.2234

Bowdle A; Brosseau LM; Tellier R; MacIntyre CR; Edwards M; Jelacic S, 2024, 'Reducing airborne transmissible diseases in perioperative environments', British Journal of Anaesthesia, 133, pp. 19 - 23, http://dx.doi.org/10.1016/j.bja.2024.03.025

Greenhalgh T; MacIntyre CR; Baker MG; Bhattacharjee S; Chughtai AA; Fisman D; Kunasekaran M; Kvalsvig A; Lupton D; Oliver M; Tawfiq E; Ungrin M; Vipond J, 2024, 'Masks and respirators for prevention of respiratory infections: a state of the science review', Clinical Microbiology Reviews, 37, pp. e00124 - e00123, http://dx.doi.org/10.1128/cmr.00124-23

Benedict Kpozehouen E; Macintyre CR; Tan TC, 2024, 'Determinants of uptake of influenza, zoster and pneumococcal vaccines in patients with cardiovascular diseases', Vaccine, 42, pp. 3404 - 3409, http://dx.doi.org/10.1016/j.vaccine.2024.04.031

Greenhalgh T; MacIntyre CR; Ungrin M; Wright JM, 2024, 'Airborne pathogens: controlling words won't control transmission', Lancet, 403, pp. 1850 - 1851, http://dx.doi.org/10.1016/S0140-6736(24)00244-7

Macintyre CR, 2024, 'Mpox, smallpox and the increasing threat of orthopoxvirus epidemics', Global Biosecurity, 6, http://dx.doi.org/10.31646/gbio.268

Ebright RH; MacIntyre R; Dudley JP; Butler CD; Goffinet A; Hammond E; Harris ED; Kakeya H; Lambrinidou Y; Leitenberg M; Newman SA; Nickels BE; Rahalkar MC; Ridley MW; Salzberg SL; Seshadri H; Theißen G; VanDongen AM; Washburne A, 2024, 'Implementing governmental oversight of enhanced potential pandemic pathogen research', Journal of Virology, 98, http://dx.doi.org/10.1128/jvi.00237-24

Poland GA; Raina MacIntyre C, 2024, 'Celebrating vaccines: The 2023 Nobel prize in medicine or physiology.', Vaccine, 42, pp. 1409 - 1410, http://dx.doi.org/10.1016/j.vaccine.2023.10.056

Wei J; Tan TC; Moa AM; MacIntyre CR, 2024, 'Cost-benefit of influenza vaccination in preventing sudden cardiac arrest amongst Australian adults', Vaccine, 42, pp. 1593 - 1598, http://dx.doi.org/10.1016/j.vaccine.2024.02.008

Raina MacIntyre C; Lim S; Gurdasani D; Miranda M; Metcalf D; Quigley A; Hutchinson D; Burr A; Heslop DJ, 2024, 'Early detection of emerging infectious diseases - implications for vaccine development', Vaccine, 42, pp. 1826 - 1830, http://dx.doi.org/10.1016/j.vaccine.2023.05.069

Zhang T; Rabhi F; Chen X; Paik HY; MacIntyre CR, 2024, 'A machine learning-based universal outbreak risk prediction tool', Computers in Biology and Medicine, 169, http://dx.doi.org/10.1016/j.compbiomed.2023.107876

Honeyman D; Notaras A; Heslop D; Raina Macintyre C, 2024, 'Botulism outbreak in russia connected to readymade salads', Global Biosecurity, 6, http://dx.doi.org/10.31646/gbio.292

Li B; Hutchinson D; Lim S; MacIntyre CR, 2024, 'An attention-based hybrid model for spatial and temporal sentiment analysis of COVID-19 related tweets in the contiguous United States', Geo Spatial Information Science, ahead-of-print, pp. 1 - 20, http://dx.doi.org/10.1080/10095020.2024.2408343

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